| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4096 |
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| Symbol | |
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| ID | 6411780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4394348 |
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| End bp | 4396273 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713978 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001993067 |
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| Protein GI | 192292462 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000111141 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCC GCTCCAATCC CGAGACCACC CGCGCGGCTG TGACCACCGG TGCCCTGCCC
TCCTCCAAGA AGATCTACGC CACGCCTGCC AGCGCGCCGG ATCTGCGCGT GCCGCTGCGC
GAGATCATCC TGAGCGAAGG CGCAGGCGAG CCGAACCTGC CGGTGTACGA CACCTCCGGC
CCCTACACCG ATCCGACCGT CGTGATCGAC GTCAACAAGG GCCTGCCGCG TCCGCGCACC
GAATGGGTCA AGCAGCGCGG CGGCGTCGAG CAATATGAGG GCCGCGACAT CAAGCCGGAA
GACAACGGCA ATGTCGGCGC TGCGCACGCG GCCAAAGCCT TCACCGCGCA TCACCAGCCG
CTGCGCGGGA TCAGTGATGC GCCGATCACC CAATACGAAT TCGCCCGCCG CGGCATCATC
ACCAAGGAGA TGATCTACGT CGCCGAGCGC GAGAATTTGG GCCGCAAGCA GCAGCTCGAG
CGTGCCGAGG CGGCGCTGGC CGATGGTGAA TCGTTCGGCG CCGCGGTGCC GGCGTTCATC
ACGCCGGAAT TCGTCCGCGA CGAGATCGCC CGCGGCCGCG CCATCATTCC GGCCAACATC
AATCACGGCG AACTCGAGCC GATGATCATC GGCCGCAACT TCCTCACCAA GATCAACGCC
AATATCGGCA ACTCGGCGGT GACCTCGTCG GTCGAGGAGG AAGTCGACAA GATGGTGTGG
GCGATCCGCT GGGGTGCCGA CACCGTGATG GACCTCTCGA CCGGCCGCAA CATTCATACC
ACCCGCGAAT GGATCTTGCG CAACTCGCCG GTGCCGATCG GCACCGTGCC GATCTATCAG
GCGCTGGAGA AGTGCGAAGG CGATCCGGTC AAGCTGACCT GGGAGCTGTA CAAGGACACG
CTGATCGAGC AGGCCGAACA GGGCGTCGAT TACTTCACCA TCCACGCCGG CGTGCGGCTG
CAGTACATCC ACCTCACCGC CAGCCGGGTC ACCGGCATCG TGTCGCGCGG CGGCTCGATC
ATGGCGAAGT GGTGCCTGGC GCATCACAAG GAGAGCTTCC TCTACACGCA TTTCGACGAG
ATCTGCGACC TGATGCGGAA GTACGACGTG TCGTTCTCGC TCGGCGACGG CCTGCGGCCG
GGCTCGATCG CGGACGCCAA CGACCGCGCC CAGTTCGCCG AACTGGAGAC GCTCGGCGAG
CTCACCAAGA TCGCCTGGGC CAAGGGCTGC CAGGTGATGA TCGAAGGCCC CGGCCACGTG
CCGATGCACA AGATCAAGAT CAACATGGAC AAGCAGCTCA AGGAGTGCGG CGAGGCGCCG
TTCTACACCT TGGGCCCGCT GACCACCGAT ATCGCACCGG GCTATGATCA CATCACTTCC
GGCATCGGCG CCGCGATGAT CGGCTGGTTC GGCTGCGCGA TGCTGTGCTA CGTCACGCCG
AAGGAGCATC TCGGCCTGCC CGACCGCAAT GACGTCAAGA CCGGCGTGAT CACCTACAAG
ATCGCCGCCC ACGCCGCCGA CCTCGCCAAG GGCCACCCCG CCGCCCAGCT CCGCGACGAC
GCACTCTCCC GTGCAAGGTT CGAATTCCGC TGGCAGGACC AGTTCAATCT CGGCCTCGAT
CCGGACACGG CGCAGGCCTT CCACGACGAG ACCCTACCGA AGGACGCCCA CAAGGTCGCG
CATTTCTGCT CGATGTGCGG CCCGAAATTC TGCTCGATGA AGATCACGCA GGACGTCCGC
GACTACGCCG CCGGCCTCGG CGACAACGAG AAAGCCGCCC TCTACCCGGT CGGCCACGCC
GGCATGACCA TCTCCGGCAC CATCGAAGAC GGCATGGCCC AGATGAGCGC CAAGTTCAAA
GAGATGGGAA GCAGCGTGTA TCTCGATGCC GACAAGGTGA AAGAGAGCAA CAAGGCGCTG
TCGTAA
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| Protein sequence | MNIRSNPETT RAAVTTGALP SSKKIYATPA SAPDLRVPLR EIILSEGAGE PNLPVYDTSG
PYTDPTVVID VNKGLPRPRT EWVKQRGGVE QYEGRDIKPE DNGNVGAAHA AKAFTAHHQP
LRGISDAPIT QYEFARRGII TKEMIYVAER ENLGRKQQLE RAEAALADGE SFGAAVPAFI
TPEFVRDEIA RGRAIIPANI NHGELEPMII GRNFLTKINA NIGNSAVTSS VEEEVDKMVW
AIRWGADTVM DLSTGRNIHT TREWILRNSP VPIGTVPIYQ ALEKCEGDPV KLTWELYKDT
LIEQAEQGVD YFTIHAGVRL QYIHLTASRV TGIVSRGGSI MAKWCLAHHK ESFLYTHFDE
ICDLMRKYDV SFSLGDGLRP GSIADANDRA QFAELETLGE LTKIAWAKGC QVMIEGPGHV
PMHKIKINMD KQLKECGEAP FYTLGPLTTD IAPGYDHITS GIGAAMIGWF GCAMLCYVTP
KEHLGLPDRN DVKTGVITYK IAAHAADLAK GHPAAQLRDD ALSRARFEFR WQDQFNLGLD
PDTAQAFHDE TLPKDAHKVA HFCSMCGPKF CSMKITQDVR DYAAGLGDNE KAALYPVGHA
GMTISGTIED GMAQMSAKFK EMGSSVYLDA DKVKESNKAL S
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