Gene Rpal_4087 details

Gene Information

• Locus tag: Rpal_4087
• ID: 6411771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 4385790
• End bp: 4386329
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642713969
• Product: PRC-barrel domain protein
• Protein accession: YP_001993058
• Protein GI: 192292453

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0638202
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCCA ACACGATCAT CGCCGGCCTG CTGAGCTCCA CGCTGCTCGC CACTGCTGCC 
TACGCGCAGA CTCCGGCGCC GGCGGACAGC ACCCGCACGA TGTCGAAGTC GACCTCTGCG 
TCCGAGTCGC AGCACATGGG TCAGTGGCGT GCCTCGAAGC TGATCGGCGT CAACGTCTAC 
AACCAGGGCA ACGAGAAGCT CGGCGACATC AGCGAAATGC TGATCGATAG CGAAGGCCGC 
ATTCAGGGCG TCGTGATCGG CGTCGGCGGC TTCCTCGGCG TCGGCCAGCG CGATGTCGCG 
GTAACCTTCG ACAAGCTGCA GTGGGTCAAC ACGCCGGTTT CGTCCAATAC CGCGATGAAC 
AGCCAGACCA CTCCGGCGGG TTCGGGCACT TCGACCGCAT CGCCGGCCGG CACCACCACC 
GGCGCGGCAA CTTCGACCAC GGCCGCGAAC AATGCGGATC GTTGGTATCC GGACCACGCG 
GTGCTGAATG CCACCAAGGA TCAGCTGAAG TCGATGCCGG AGTTCAAGTA CTCCAAGTAA 

 

Protein sequence

MKANTIIAGL LSSTLLATAA YAQTPAPADS TRTMSKSTSA SESQHMGQWR ASKLIGVNVY 
NQGNEKLGDI SEMLIDSEGR IQGVVIGVGG FLGVGQRDVA VTFDKLQWVN TPVSSNTAMN 
SQTTPAGSGT STASPAGTTT GAATSTTAAN NADRWYPDHA VLNATKDQLK SMPEFKYSK