| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4063 |
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| Symbol | |
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| ID | 6411747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4361662 |
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| End bp | 4362903 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713945 |
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| Product | Extensin family protein |
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| Protein accession | YP_001993034 |
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| Protein GI | 192292429 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCG GAGTTCGTTT GTATCTCGTC GGCTCCTTCG TCCTCGTCTC TCTCGCGGGT
TGCGGTCGCG GTCTGTTTCA GACCGCCGAG CGCGAACCGT GGCGAGCCGA GGCCGAGATC
GCGTGCTTGA AATCCGGCGT GGTCCGCGAA GGACCGGATC TGGTCCGGAT CGATCCGATC
TCAGGCCCTG GTGTGTGTGG TGCCGAGTTT CCGCTGAAGG TGGCGGCGCT CGGCGAAACC
GGCGCGATCG GTTTCGCCGA CGATCTGCGG CCGCCGGGTG CGATCGGCGG TGCCGGCCAA
AGCCAGCCGC GCTGGCCGGG CGGCCAGCCG CAACCGAACT ACGCGACACC TCAACGTGGC
TATGCCGAAC CGCCGGCGCG CGCGCCGAAC TACGGCGCAC AGCCGCAGGC CGGCTACGGC
GCGCCGCAGG GCGGCTACGG CAAAGCGCCG GTGTCGCTGA ACGCGCCGGG CGTGGGGCCG
GCTCAGGACG ATATCGAACT GCCGCCGGAA GGCGAGCCGT CCGCCGAGCG TCCGCCGGCC
GAGAACGTCA CCGGCTATCC GCGCGGTGCT GCGCCGCAGG GCGGCTATCC CGGCGAAGCG
GAGCGGCCGC TGCCGCGGCT CGGCCCGGGC CAGCAGGGCG GCATCACCGG CTCGGTGGGG
CCGGTTGCGA TCAAGCCGAC CGCGACGCTG GCGTGTCCGA TCGTGTCGGC GCTCGATCGC
TGGCTGGCGG AATCCGTGCA GCCTTCGGCG ATGCGCTGGT TCGGCGTCCG CGTCGTCGAG
ATCAAGCAGA TCTCGGCGTA TTCGTGCCGC GGCATGAACG GCAATCCGAA CGCCCACATC
TCCGAACACG CATTCGGCAA CGCGCTCGAT ATCGCCGCCT TCGTGCTGGC CGATGGCCGC
CGCATCACCG TCAAGGGCGG CTGGCGTGGA TTGCCGGAGG AGCAGGCGTT CCTGCACGAC
GTGCAGAACT CGGCGTGCCA GATGTTCACC ACGGTGCTGG CGCCGGGCTC GAACGTCTAT
CACTACGATC ACATCCACGT CGATCTGATG CGGCGGCGCA GCCAGCGCAC GATCTGCAAG
CCGGCCGCGG TGTCCGGCGA AGTGATCGCG CAGCGGCTGC AGCAGCGCAA TCCTTACGCG
GGCAGTGCGT CGCCGGGGCC GGGCTGGAAC GGCGTCACCG GCTCGATCGG CCGCAACGCG
TCGCGCCACA AGGTCGATCG CGACGAGGCC GAGGACGATT AG
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| Protein sequence | MTRGVRLYLV GSFVLVSLAG CGRGLFQTAE REPWRAEAEI ACLKSGVVRE GPDLVRIDPI
SGPGVCGAEF PLKVAALGET GAIGFADDLR PPGAIGGAGQ SQPRWPGGQP QPNYATPQRG
YAEPPARAPN YGAQPQAGYG APQGGYGKAP VSLNAPGVGP AQDDIELPPE GEPSAERPPA
ENVTGYPRGA APQGGYPGEA ERPLPRLGPG QQGGITGSVG PVAIKPTATL ACPIVSALDR
WLAESVQPSA MRWFGVRVVE IKQISAYSCR GMNGNPNAHI SEHAFGNALD IAAFVLADGR
RITVKGGWRG LPEEQAFLHD VQNSACQMFT TVLAPGSNVY HYDHIHVDLM RRRSQRTICK
PAAVSGEVIA QRLQQRNPYA GSASPGPGWN GVTGSIGRNA SRHKVDRDEA EDD
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