| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4046 |
|---|
| Symbol | murB |
|---|
| ID | 6411729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4341275 |
|---|
| End bp | 4342204 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642713928 |
|---|
| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| Protein accession | YP_001993017 |
|---|
| Protein GI | 192292412 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.185297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCC CCGATATCAC GCCCGATCTG AAAGCCGCGA TGCCGGAGCT GCGCGGGCGG
CTGCTCGGCA ACGAGCCGCT GGCGCCGCTG ACCTGGTTTC GCGTCGGCGG GCCGGCGCAG
GTGCTGTTCA CGCCGGCCGA TGAGGATGAT CTCGGTTACT TCCTGTCGCG GCTGCCGGCC
GAGATTCCGG TGATGTGTCT TGGGCTCGGC TCCAACCTGA TCGTGCGCGA CGGCGGGCTG
CCCGGCGTCG CGATCCGGCT GTCGCCGCGC GGCTTTGGTG AGCATCGCGT CGAGGGCGAG
GTGGTCCATG CTGGGGCCGC CGCGCTCGAC AAGCGCGTGG CCGAGACCGC GGCTGCTGCG
CAGCTCGGCG GGCTGGAGTT CTACTACGGC ATTCCCGGCT CGATCGGCGG TGCGCTGCGG
ATGAACGCAG GCGCCAACGG CCGCGAGACC AAGGACGTGC TGATCGACGC CACCGCCTAT
GATCGCAGCG GCACGCGCAA ACTATTCGAC AATGCGGCGA TGCAGTTCTC GTATCGCCAC
AGCGGCGCCG ATCCTGCGTT GATCTTCACC TCGGCGCGGC TGCGCGGCAC GCCGGCGACG
CCGGATCACA TCCGCGCCAA GATGAACGAG GTGCAGGCGC ATCGCGAGCT GGCGCAGCCG
ATCCGCGAGA AGACGGGTGG CTCGACCTTC AAGAATCCGC CCGGCCAGAG TGCGTGGCGC
CTGATCGATG CTGCCGGCTG CCGCGGCCTC AAGATCGGCG GCGCGCAGGT GTCGGAGATG
CACTGCAATT TCCTGATCAA CACCGGTGAA GCTACCGCCG CCGATATCGA GACGCTGGGC
GAGACCGTCC GCGCCCGCGT CAAGGCGCAG TCCGGCGTCG AGCTGCAGTG GGAAATCAAG
CGGATCGGCG TCGCGGCCGG GCAGAGCTGA
|
|---|
| Protein sequence | MSFPDITPDL KAAMPELRGR LLGNEPLAPL TWFRVGGPAQ VLFTPADEDD LGYFLSRLPA
EIPVMCLGLG SNLIVRDGGL PGVAIRLSPR GFGEHRVEGE VVHAGAAALD KRVAETAAAA
QLGGLEFYYG IPGSIGGALR MNAGANGRET KDVLIDATAY DRSGTRKLFD NAAMQFSYRH
SGADPALIFT SARLRGTPAT PDHIRAKMNE VQAHRELAQP IREKTGGSTF KNPPGQSAWR
LIDAAGCRGL KIGGAQVSEM HCNFLINTGE ATAADIETLG ETVRARVKAQ SGVELQWEIK
RIGVAAGQS
|
|---|
| |