| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4018 |
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| Symbol | |
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| ID | 6411701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4306666 |
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| End bp | 4308093 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713900 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_001992989 |
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| Protein GI | 192292384 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.566577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCCTGA CCATCACCAA CACGCCGAAG CGCGCCGAGC CGCAGGCCGT GGCAAGCGCC
ATTGAAGCGC TCGCGGCGCG GTTCGGCAAC CGCCTCGTCA CCTCGCTGGC CGTGCGCGAG
CAGCACGGCC ACACCACGAC CTGGCTGCCG AACCAGCCGC CGGACGCGGT GGTGATGGCG
CAGGAAACGG CGGACATTCA GGACACGGTG CGGATCTGCG CGCAGCACAG CGTGCCGGTG
ATCGCGTTCG GCACCGGCAC GTCGCTGGAG GGCCACGTCA ACGCTCCGGC CGGCGGCATC
TGCATCGACC TGCGTGACAT GAACAAGATC CTCGAAGTCC ATGCCGAGGA TCTCGACTGC
GTGATTCAGC CCGGCGTCAC CCGCAAAGCG CTGAACGAGA ACCTGCGCGA CCAGGGGCTG
TTCTTCCCGA TCGATCCCGG CGCCGACGCC TCGATCGGCG GCATGGCGGC GACCCGCGCC
TCCGGCACCA ACGCGGTGCG CTACGGCACG ATGCGCGACA ACATCCTGGC GCTGAAGGTG
GTGCGCGGCG ACGGCGAGAT CATCACCACC GGCACCCGCG CCAAGAAATC GGCCGCCGGC
TACGACCTGA CTCACCTGTT CGTCGGCTCG GAAGGCACGC TCGGCATCAT TTCCGAGCTG
ACTATCAAGC TGCGCGGCAT CCCGGAGACG ATCGCGGCAG CGTCCTGCTC GTTCCCGTCG
GTCAGCGACG CCTGTCAGGC GGTGATCCTG GCGATCCAGA CCGGCATTCC GTTGGCCCGG
ATCGAGCTGA TGAGCGAGTC GCAGGTCAAG GCGGTGAACG CTTATTCCAA GCTGACCCTG
CCGGAAACCC CGCTGCTGTT GCTCGAATTC CACGGCAGCG AGGTCGAGGT CGGCGAGCAG
TCGAAGAATT TCGGCGCCAT CGCCAAGGAT TGCGGCGGCG GCGACTTCAC CTGGACGACG
CGTCCAGAGG ATCGCAACAA GCTGTGGCAG GCCCGGCACG ACGCCTACTG GTCGGTGCGG
GCGCTGCGTC AGGGCGATGG CGTCGGCGTC GTCGCCACCG ACGTCTGCGT GCCGATCTCG
CGGCTGGCCG ATTGCGTCGG CGAGACCGAG GCCGATCTCA ACCGGCTCGG CCTGCTGGCG
CCGATCGTCG GGCATGTCGG CGACGGCAAC TTCCATTGCT CGCTGCTGTG CGACGTCAAC
GATGCCGAAG AGCTGGCGCG GGCCGACGAG TTCATGCACC GGCTGGTCGA GCGGGCGCAG
TCGATGGACG GCACCTGCAC CGGAGAGCAC GGCATCGGCC AGGGCAAGCA GAAATATCTG
CAGGCCGAGC TCGGCCTCGA AGCGCTGCAG GCGATGCGCG CGATCAAGCA GGCGCTTGAT
CCGCAGAACA TCTTCAATCC CGGCAAGATC CTGCCGCAAG GGATTTGA
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| Protein sequence | MGLTITNTPK RAEPQAVASA IEALAARFGN RLVTSLAVRE QHGHTTTWLP NQPPDAVVMA
QETADIQDTV RICAQHSVPV IAFGTGTSLE GHVNAPAGGI CIDLRDMNKI LEVHAEDLDC
VIQPGVTRKA LNENLRDQGL FFPIDPGADA SIGGMAATRA SGTNAVRYGT MRDNILALKV
VRGDGEIITT GTRAKKSAAG YDLTHLFVGS EGTLGIISEL TIKLRGIPET IAAASCSFPS
VSDACQAVIL AIQTGIPLAR IELMSESQVK AVNAYSKLTL PETPLLLLEF HGSEVEVGEQ
SKNFGAIAKD CGGGDFTWTT RPEDRNKLWQ ARHDAYWSVR ALRQGDGVGV VATDVCVPIS
RLADCVGETE ADLNRLGLLA PIVGHVGDGN FHCSLLCDVN DAEELARADE FMHRLVERAQ
SMDGTCTGEH GIGQGKQKYL QAELGLEALQ AMRAIKQALD PQNIFNPGKI LPQGI
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