| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4007 |
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| Symbol | thyA |
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| ID | 6411689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4293858 |
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| End bp | 4294652 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713889 |
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| Product | thymidylate synthase |
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| Protein accession | YP_001992978 |
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| Protein GI | 192292373 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.997554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCAAT ATCAGGACCT GCTCGAACGC ATCTTGAGCG ACGGGGCCGA AAAGCACGAC
CGCACTGGCA CCGGCACGCT GTCGGTATTC GGGCATCAGA TGCGGTTCGA CCTCGCCGCC
GGCTTTCCGA TGCTGACCAC CAAGCGGCTG CCGCTGAAGG CGATTGTGCA CGAGCTGCTA
TGGTTCCTGC AGGGCGATAC CAACATCAAA TACCTGCACG ATCACGGCGT CACGATCTGG
GACGAGTGGG CGGACGCCAA CGGCGATCTC GGCCCGGTGT ACGGCGCACA GTGGCGCTCG
TGGCCGACCG CGGATGGTGG CTCGATCGAT CAGATCGCCA ATGTGGTCGA GATGATCAAA
CGTAATCCGG ACTCGCGGCG GCTGATGGTG ACGGCGTGGA ATCCGGCTGA CGTCGAGAAG
ATGGCGCTGC CGCCGTGCCA CTGCCTGTTC CAGTTCTATG TCGCGAACGG CAAGCTGTCG
TGTCAGCTGT ATCAGCGCTC GGCCGACGTT TTTCTCGGCG TGCCGTTCAA CATCGCATCG
TACGCGCTGC TGACGCTGAT GGTGGCGCAA GTCACTGGTC TAAAGCCCGG CGAGTTCGTC
CACACCCTTG GCGACGCGCA CCTGTATTCC AATCACCTGG AGCAGGCGCG GCTGCAACTG
ACCCGTGCCC CGCGCGCGCT GCCGGTGATG ACGATCAATC CGGCGGTGAA CGACATCTTC
GGCTTCCGCT ACGAGGATTT CACCCTGACC GGCTACGATC CGCATCCGCA CATCAAGGCC
GAGGTGGCGG TGTGA
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| Protein sequence | MIQYQDLLER ILSDGAEKHD RTGTGTLSVF GHQMRFDLAA GFPMLTTKRL PLKAIVHELL
WFLQGDTNIK YLHDHGVTIW DEWADANGDL GPVYGAQWRS WPTADGGSID QIANVVEMIK
RNPDSRRLMV TAWNPADVEK MALPPCHCLF QFYVANGKLS CQLYQRSADV FLGVPFNIAS
YALLTLMVAQ VTGLKPGEFV HTLGDAHLYS NHLEQARLQL TRAPRALPVM TINPAVNDIF
GFRYEDFTLT GYDPHPHIKA EVAV
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