| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3979 |
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| Symbol | |
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| ID | 6411661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4270735 |
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| End bp | 4271232 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713861 |
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| Product | phage prohead protease, HK97 family |
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| Protein accession | YP_001992950 |
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| Protein GI | 192292345 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3740] Phage head maturation protease |
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| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAAGG TTGAGATAAA GGCGACGCTC GCCGTCGACG ATGCCGGCGT TATCACCGGC
ATCGCATGGC CGTTCGGCTC GCCCGACAGC GTCGGTGATA TCATCACCAA GGGCGCTTTC
AACGTCGCGG TGTCCGATCT GCCGATGCTC TTCCAGCACG ACCCGGCAGA CCTTGTCGGC
ACCTGGGAAG AGGTTCGCGA AACCGACGAA GGGCTCGCCG TGAAAGGCAA GCTGCATCTC
GCCGAAAGCG CCCGCGCTCG GGCAGTCCGC GGCCTTGTGC AGGGAAAGCT GATTGAAGGT
CTGTCCATCG GCTTTCGGAC CAAGGCATCC GCTCGTCAGG GCAGCAATCG CGTCATCTCG
GCGCTGGATC TCTTCGAGAT CAGCCTTGTC CGAAATCCCA GCCATCCTAA GGCGCGCGTC
ACCAGCGCGA AGCAATTCAA TTCGGCCGAA GCAATCGCCG CGGCCATCAA CAGCGCTGCG
GCGCAAATCA GGAAGTGA
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| Protein sequence | MDKVEIKATL AVDDAGVITG IAWPFGSPDS VGDIITKGAF NVAVSDLPML FQHDPADLVG
TWEEVRETDE GLAVKGKLHL AESARARAVR GLVQGKLIEG LSIGFRTKAS ARQGSNRVIS
ALDLFEISLV RNPSHPKARV TSAKQFNSAE AIAAAINSAA AQIRK
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