| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3975 |
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| Symbol | |
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| ID | 6411657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4268318 |
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| End bp | 4269514 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642713857 |
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| Product | phage portal protein, HK97 family |
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| Protein accession | YP_001992946 |
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| Protein GI | 192292341 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTG CTTCCCGAGT TCAAAGTTGG TTCGGCCTCG AAAAGAAGGC CGGCATTGCC
GCGCCCGAAC CATGGCTGTT TGAGCTTTTC GGCGCCCAAG CGTCCGGATC CAGCATTCGA
GTAACGCCGC GGATCGCGAT GGAGTGCGCG CCGGTCGCCT GCGCCGTCAA CGCGATCTCT
CAAGCGGTTG GCCTTCTGCC GGTCCACATC CTTAAGCGCG GCACGGATGG CGCGAAGGAT
CGCGCGCCGG AACACCCGGC CTATCGACTG CTGCACCACG AAGCGAACGA ATGGACCCCT
GCCGGCAAAC TCCGCCAAGA GGTTACCCGC GACGCTCTGC TTTATAAGCA CGGCGGCTTC
GCCGAGATCA TCCGAGTTGG AGACGGTCGG CCCTTCGAGC TCATTCGGAT CGACCCCGAA
GTCTCGCCGA TCACCGTCAC CATGACGAGT GACGGTCCGG CCTACGCCGT TCAAGAGGAC
GGCATCACCC GCCAGATCGA TCGCGCCAAC ATCCTGCATA TCCCGAGCCC TTCACTGTCG
GGCTTGGGCC TCGCGCACGA TGCGCGGAAG GTGATCGGCC TGTCACTGCT GATGGAGCGG
CACGCCGAGC GGCTATTCGC CAACGGCGCC CGCCCCTCTG GATTGCTTTC ACTCAAAGGC
AACATCAGCA CCGACACTCT GAAGAATGCC AGGGCCGCAT GGAATGCCCA GCACTCCGCT
GCAAATAGCG GCGGCACCGC CGTGTTGCCC GCGGATGTTG TTTGGCAATC TCTCACTCTT
AATTCCGCCG ACGCTCAGTT CCTTGAACTG CGCAAGTATC AGATCGAAGA GACGTCGCGC
ATTTTTCGCG TCCCTCCGCA TCTGCTCTAC GAAATGGGCC GGGCAACTTG GGGCAACAGC
GAGCAAGTTG GTCAAGAATT CCTTGACTTC TCACTGATGC ATTGGGTCTC AGCCTGGGAA
GGGGAGATTC GGTTAAAGCT ATTCGACCGC GAAGAGCGCG ACAAATACAT CGCTGAGTTC
TTCACCGATG GCTTTGCACG CGCCGATCTC GCCGCGCGAA TGGATGCCTA CAGCAAGGCT
ATCGCCGCCC GCATCCTCAG TCCGAACGAA GCTCGCGCTG CCGAGAATCG CCCGCCGTAT
TCCGGCGGCG ACCGCTTCGA AAACCCGAAC ACCACCGCTT CGGGAGCCGC CGCATGA
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| Protein sequence | MTIASRVQSW FGLEKKAGIA APEPWLFELF GAQASGSSIR VTPRIAMECA PVACAVNAIS
QAVGLLPVHI LKRGTDGAKD RAPEHPAYRL LHHEANEWTP AGKLRQEVTR DALLYKHGGF
AEIIRVGDGR PFELIRIDPE VSPITVTMTS DGPAYAVQED GITRQIDRAN ILHIPSPSLS
GLGLAHDARK VIGLSLLMER HAERLFANGA RPSGLLSLKG NISTDTLKNA RAAWNAQHSA
ANSGGTAVLP ADVVWQSLTL NSADAQFLEL RKYQIEETSR IFRVPPHLLY EMGRATWGNS
EQVGQEFLDF SLMHWVSAWE GEIRLKLFDR EERDKYIAEF FTDGFARADL AARMDAYSKA
IAARILSPNE ARAAENRPPY SGGDRFENPN TTASGAAA
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