| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3966 |
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| Symbol | |
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| ID | 6411647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4257349 |
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| End bp | 4257798 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713847 |
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| Product | TonB system transport protein ExbD |
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| Protein accession | YP_001992937 |
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| Protein GI | 192292332 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTT CGCTCGGCAA TTCCGACGAT CTCGACGACG ATTTCGACGA GACCCACGAG
ATCAACGTCA CGCCGTTCAT CGACGTGATG CTGGTGCTGC TGATCATCTT CATGGTGGCG
GCGCCGCTGT CGACGGTCGA CCTGCCGGTC AGCCTGCCGA CCTCGAGCGC CACCCCGCAG
AAGCGTCCGG ACAAGCCGAC TTATGTCAGC ATCAAGTCCG ATCTCGCGGT GGCGATCGGC
GAGAACCAGG TCAAGCGCGT CGACCTGGTG AAGACGCTGG ACACGATGCC GGACATGACC
AAGGACCGCT TCATCTTCCT GCGTGCCGAT CGCGCCGTGC CATACGGCGA GCTGATGGAG
GTGCTGGAGA TGCTGCGCTC TGGTGGTTAT GCCAAGATCA AGCTGGTGGC GCTGGAAGCG
GTGCCCGGCG CCAAGCCGGA CGGCAATTAG
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| Protein sequence | MAVSLGNSDD LDDDFDETHE INVTPFIDVM LVLLIIFMVA APLSTVDLPV SLPTSSATPQ
KRPDKPTYVS IKSDLAVAIG ENQVKRVDLV KTLDTMPDMT KDRFIFLRAD RAVPYGELME
VLEMLRSGGY AKIKLVALEA VPGAKPDGN
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