| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3958 |
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| Symbol | |
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| ID | 6411639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4247768 |
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| End bp | 4248694 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713839 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001992929 |
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| Protein GI | 192292324 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.809225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAGA CCACCGCCAC CGATCCCCGG CTCGCCGTGA AAGTCGCCGC CACCGTCGCG
CAGAGCGACG ACAGCGAGGG AATGAGCTAT CTGGAGTCGC TGCCGCGCCG GCTGGTGACC
CTGTATTTGC CGCTGCTCAT CATCCTGGTG GTGCTGCTGT TCCCGTTCTA CTGGATGGCG
CTGACGTCGA TCAAACCCGA CGAACAGCTG ATCGACATGG AGACCTACAA CCCGTTCTGG
GTGGTCAAGC CGACGCTGAA GCACATCCAG AAGCTGCTGT TCGAAACCCA ATATCCGCGT
TGGCTGTGGA ACACGATGTA CGTCGCGGCG GCCTCGACGG TGCTGTCGAT CGGCGCCAGC
GTGCTCGCCG CCTACGCGAT CGTGCGACTG CGTTTCCGCG GCGCCGACAC CGTGGGCGGC
GCAATCTTTT TGGCCTATCT GGTGCCGCCG TCGATCCTGT TCATCCCGCT GGCCTCGGTG
ATCCAGGCCT ATGGACTGTT CGACTCGCCG CTGTCGCTGA TCCTGGTGTA TCCGACGCTG
CTGATCCCGT TCTCGACCTG GTTGCTGATG GGCTATTTCA AGACCATCCC GTTCGAGCTC
GAGGAATGCG CGCTGATCGA CGGCGCGTCG CGCTGGCAGA TCCTGGTCAA GATCATCATT
CCGCTGGCGG TACCGGGGCT GATCTCGGCC TTCATCTTCT GCTTCACGCT GTGCTGGAAC
GAATTCATCT ACGCGCTGAC CTTCCTGCAA TCGACGCCGA ACAAGACCGT GCCGGTGGCG
ATCGTCAACG AGTTCGTCGA CGGCGACATC TACAAATGGG GCTCGCTGAT GGCCGGCGCC
CTGGTCGGCT CGCTGCCGCT CGTCATCCTC TACGCCTTCT TCGTCGAACA TTACGTGTCG
GCGATGACCG GGGCGGTGAA GGAGTAG
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| Protein sequence | MTETTATDPR LAVKVAATVA QSDDSEGMSY LESLPRRLVT LYLPLLIILV VLLFPFYWMA
LTSIKPDEQL IDMETYNPFW VVKPTLKHIQ KLLFETQYPR WLWNTMYVAA ASTVLSIGAS
VLAAYAIVRL RFRGADTVGG AIFLAYLVPP SILFIPLASV IQAYGLFDSP LSLILVYPTL
LIPFSTWLLM GYFKTIPFEL EECALIDGAS RWQILVKIII PLAVPGLISA FIFCFTLCWN
EFIYALTFLQ STPNKTVPVA IVNEFVDGDI YKWGSLMAGA LVGSLPLVIL YAFFVEHYVS
AMTGAVKE
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