| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3954 |
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| Symbol | |
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| ID | 6411635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4242529 |
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| End bp | 4243410 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713835 |
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| Product | dehydratase |
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| Protein accession | YP_001992925 |
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| Protein GI | 192292320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.21274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC ATCATGAGAC CTACACCGCG CCGCCGTTCG GCCCCGCGCT GATGTTGAAC
GCCTTCGCGC CATCGCGCGG CTGGAATCCG AAAGACGGCT TCCCGGATTT CAGCTTCATC
TGGCGCGGCT ATCAGATCAG TCCTGCTGCG CTGGCGACCT TGCAGCGCGC TGCGGGCCGC
GACGATGCGG CGACGGCAGA CCGCCTGATA CTGCTGGCGC CGCATGTCAC CGGTTTCCGG
CTGACGATGG CGCTGCTGAT GTGCCGGGAC TGGCCGCTGC CGATCTGGCG TGCGCTGCAG
CTGCGCAACC GGCTGATCCG CAGCGGCGAT ATCAAGCTCG ACGCTGCGTC CGACCTGATC
GTGCGGGCGA TAGGCTGGCG GGTGCACGAC AAGGGCATCG AACTCGACGT TCTGGCGCAA
CTGATGCAGG GCGGAGATTG CCCGTGGCAG AGCATCACCA CGTTCTATTA TCGCGGCCGC
TTCGACGGGC CGGCGAGCCA CGGCGCCGAT GATGGCGCGC CGATGGCCTC GCCCCCGATC
GATCCGTCGC TGCCGCCACT GACGCAATGG ACCGTGGATG GCGGCGAGCG GCTGCGCTGG
GCGGCGCTGA CCGGCGACTA CAATCCGCTG CACCTCGTCG ATATCTACGC CCGCGCCACC
GGCTTTGCCG CCGCCTCGGC CCACCCGCAG CGCATCGCGG CGCAATGCCT CGGGCACCTC
GCGCCGTCGC AGCCGCCGCG CCAGCTCGAT CTATGGCTGA AAGGCCCGGT GTATTTCGGC
CGCGCCGCAT CGCTGCGCGA GACTTCGAAC GGTGACGGCA CCACTTTCGG GCTCTGGATC
GACGGTGACG ATCGTCCGGC AATGGTGGGG GTGATGCGCT AG
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| Protein sequence | MTTHHETYTA PPFGPALMLN AFAPSRGWNP KDGFPDFSFI WRGYQISPAA LATLQRAAGR
DDAATADRLI LLAPHVTGFR LTMALLMCRD WPLPIWRALQ LRNRLIRSGD IKLDAASDLI
VRAIGWRVHD KGIELDVLAQ LMQGGDCPWQ SITTFYYRGR FDGPASHGAD DGAPMASPPI
DPSLPPLTQW TVDGGERLRW AALTGDYNPL HLVDIYARAT GFAAASAHPQ RIAAQCLGHL
APSQPPRQLD LWLKGPVYFG RAASLRETSN GDGTTFGLWI DGDDRPAMVG VMR
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