| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3925 |
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| Symbol | |
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| ID | 6411605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4209018 |
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| End bp | 4210763 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642713806 |
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| Product | protein of unknown function DUF87 |
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| Protein accession | YP_001992897 |
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| Protein GI | 192292292 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAC GCAGCCCAAA TTCAGTCAAT GAAGCGCCTG CGGGTTGGCG CACCGTAGGG
ACTGTCGTTG GCAATGCCGG CATTGCCGAA TTCACCTTCA TTCTTCGCCG ATTTCAAGCT
CGCGTAGGCG ACATTGTGGC GCTTGGAATG GAAGTGCCCG ATGGCTCCTA CGGTAACCGG
CAGAGAATCT ATGTCTGGGC CCGGATTACG GATATCCGTC GCTTCAATCC GTTCTTCCCA
ACTGAAGCGG CCCAAGAATT AGCCGCTCAC TCAGTGTCTC TGGAGGATAC AGTTCTCGCA
GGCACCCTTG ACCAACTTGA AGCATCCGCG CTGATACTTG GGGCGACAAC TGAGACGAAT
CTCGCAGATA TCTTCCCTCT TACATATCCG GTCAAACCGG CCACGACTGT CTTCAACCCA
CCAGCAGCCG CAGTACGCCA GCTTCTTCTG GGAGATAGAA CGAAAGAGGA AGCTATCCCA
ATAGGTACCC TTATTGCACG TAACGATGTT GAGGTCTCTC TCTCTGCCCC TAAGCTGATT
TCCCGTCATC TTGCCGTTCT GGCAATGACA GGAGGAGGCA AAACGGTGGC GGCACGGCGG
ATCATCCGCG AAATTGTGCG ACTGAAGTAT CCCCTTCTTA TCCTCGATCC TCACGGTGAC
TACATAGGGT TGTGGAAGTG TCGAGAGATG CTGCAGCAGG AGGCGCCTGG AGCGGAGATC
AAGCTCTTCT ATCCTGAGCT TCTCATGCAG AAGTCGGGAG AAGCCTTGGT TGAGAAGCTA
ATTTCACAAA TGACCAATGG GCTGACGGAG CCCCAGGCAG ACTATATTCG TCATCTCTTT
GGAAGAAAGA CTGCGAAGGA AGGTGAGCAT GCGCTTGACT ACATCAAGCG GCTCATCGCG
CAGAACGAAC TGGACGCAAG GAGCAATACC GGTGGTGGCG CGCGGCCGCC CACCATGTTT
GCAGTACTCC GTGCCATGCG CATCGTCGAG GGGAAGCTTT CGGCGATGCG CACCAGCAGT
GAGATGATGC GTCGGAGCTC TAAGCTGAAG AATCTGAGTT TTGAGCCGCT GCCAAACCCG
TTCAGCGAAC CGGAGAAGAT TATCCGTCCG GGCCAGACCT CAATTCTTTA TCTTGGCGGA
TACGATCAGC TCACTCAGTG CTCCATAGCA GCGATCACAT TGGAAACTCT CTTCGAGTTT
CGAGCCTCGC TGTCAGAGCG AATTTCTCCC TTTTTTACTG TCATCGAGGA AGCGCACACA
TTTATTCCGT CTACCCGCGA GAAAACCGAC GATGCGGTCT CTCTTCCCAT TGTCCGCAGG
ATCATCACGG AAGGTCGGAA ATTTGGAACG GGGCTGATGC TAATCTCTCA AAGGCCTAGC
CGCCTCGACG AGACGATTGT CTCTCAATGC AACTCCTTCC TTATCCTCCG TGTTGTAAAT
CCAAATGATC AAACCTTTGT TCGAAGAGTC ATGGAAAATT TGACGGATTC AGACGCTCGG
ATGATACCAG GCTTTGGGCC AGGTCAGGGG ATAGTTAGCG GGCAGGTCGT GAGATTTCCT
CTCCCGGTCA GGGTGACGAT GGATGAGGAG CTTCGATTGT CGGAGATCGG TGATGAGGAT
TTTTTGGCGC AGGCTGGCAA GTGGAAGCCA GATGCCAAGT CCGCGACACG GCAGAAATTT
AAGGAAGGAA TGGCTAAGGT CGACGCAAAC CGTGGAAGAG GGAGAGTGAA GAAGGGTAAG
AGATAG
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| Protein sequence | MDQRSPNSVN EAPAGWRTVG TVVGNAGIAE FTFILRRFQA RVGDIVALGM EVPDGSYGNR
QRIYVWARIT DIRRFNPFFP TEAAQELAAH SVSLEDTVLA GTLDQLEASA LILGATTETN
LADIFPLTYP VKPATTVFNP PAAAVRQLLL GDRTKEEAIP IGTLIARNDV EVSLSAPKLI
SRHLAVLAMT GGGKTVAARR IIREIVRLKY PLLILDPHGD YIGLWKCREM LQQEAPGAEI
KLFYPELLMQ KSGEALVEKL ISQMTNGLTE PQADYIRHLF GRKTAKEGEH ALDYIKRLIA
QNELDARSNT GGGARPPTMF AVLRAMRIVE GKLSAMRTSS EMMRRSSKLK NLSFEPLPNP
FSEPEKIIRP GQTSILYLGG YDQLTQCSIA AITLETLFEF RASLSERISP FFTVIEEAHT
FIPSTREKTD DAVSLPIVRR IITEGRKFGT GLMLISQRPS RLDETIVSQC NSFLILRVVN
PNDQTFVRRV MENLTDSDAR MIPGFGPGQG IVSGQVVRFP LPVRVTMDEE LRLSEIGDED
FLAQAGKWKP DAKSATRQKF KEGMAKVDAN RGRGRVKKGK R
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