Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3874 |
Symbol | |
ID | 6411554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4161217 |
End bp | 4162107 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642713756 |
Product | hypothetical protein |
Protein accession | YP_001992847 |
Protein GI | 192292242 |
COG category | [S] Function unknown |
COG ID | [COG3904] Predicted periplasmic protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.688417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGGACGCG CGGTTCTCTC TTGTCTGAAC GGTGGGGCGC TGGGGCGGTT GGCAGCGCTC GGCATCGTTC TACTCGGGTT CGCGGCCGAC AGCAGTATTC CTGTCACGGC CGGCGCCGGC AGTCTCGAGG CGCGGCGGCA GCCGATGAAG TTCGGCTGGG TCGCCTGTGA TCCGGATTGC GGCGGTTGGA TCAGCGCCGT CGGCATCGTC ACAACCGACA CGCCGAAGGA TTTCGAGGAC TTCGCCCGCG ATCGCAAGCT CGGCGGCGCC ACCGTGGTGC TGGATTCCAG CGGCGGCTCG GTCAACGACG CGATCACGCT CGGCCGTCGC TGGCGCAAGC TCGGGCTGGC CACCACGGTC GGCACCAGCG TGCCGTCTGC GTCGCCGCTC GGCAGCCGCG CCCGGATCGA GCCCGGTGCC TACTGCGAAT CGATGTGCGT GTTTCTGCTG CTCGCCGGCA ATTCCCGCTA TGTGCCGGAA GGGGCTCACG TGCGGGTTCA CCAGATCTGG ATGGGTGACC GCGCCGAGGA TGCCCGCGCC GCCAGCTACA GCGCGCAGGA CATGTCGATC GTCGAGCGCG ACATCGGCCG GCTGGCGAAG TTCACCTTCG AGATGGGCGG CACCGGCGAT CTGTTGTCGC TCGCCCTCAG CGTGCCTCCG TGGGAAGACC TGCACGAGCT GTCGCGAACC GAGTTGCGCG ACACCAATCT GATCACCACC CAGGCGATCG CCGATCTGCT GCCCGGCCTC GGTGGCGCAC CGGCCAAGAC CGTGGCGTCG GCGGAGCCGA AGCCGGTGCA GGACCGCTTC ACCCCGCAGC CGGCGGCCGC CACCAAGACC GCCGAGGCGC TTCCGACCGG CGGCACGGCC GCCGCGCAGC CGGGGCACTG A
|
Protein sequence | MGRAVLSCLN GGALGRLAAL GIVLLGFAAD SSIPVTAGAG SLEARRQPMK FGWVACDPDC GGWISAVGIV TTDTPKDFED FARDRKLGGA TVVLDSSGGS VNDAITLGRR WRKLGLATTV GTSVPSASPL GSRARIEPGA YCESMCVFLL LAGNSRYVPE GAHVRVHQIW MGDRAEDARA ASYSAQDMSI VERDIGRLAK FTFEMGGTGD LLSLALSVPP WEDLHELSRT ELRDTNLITT QAIADLLPGL GGAPAKTVAS AEPKPVQDRF TPQPAAATKT AEALPTGGTA AAQPGH
|
| |