Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3867 |
Symbol | |
ID | 6411547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4154509 |
End bp | 4156182 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642713749 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_001992840 |
Protein GI | 192292235 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGC GCCGGTTTCG CGCCGCTGCG GTGCAGACAC TCGCCAAGTT GGGCGATTTC GAATTCAACA TCGCGCTCGC GACGCGCTAC GTCGAGGACG CCGTCCGGCA GGGTGCCGAG CTGATCGTGT TCCCGGAGTG CATGGACACC GGCTATCTGT TCGACTCGCC CGAGCATTGC CGCGAACTCG CCGAGACGCT GACCGATGGC CCGTTCGTCA AGGCGCTGGC CGCGCTCAGC CGCAAGCACG GCGTCTATAT CGCCAGCGGC ATCACCGAAT GGGATCCGGC CAAGCAGAAG ATCTTCAACA CCGGCATCAT GTTCGACCGC CAGGGCGAGG TCGCGTGCCA CTATCACAAG CAGTTTCTCG CCACCCACGA TCAGAACTGG TTCGCGTTCG GCGAGCGCGG CTGCCCGGTG GTCGACACCG ACCTCGGCAA GATCGGCCTC CTGATCTGTT TCGACGGCCG CATCCCCGAG ATCTTCCGCG CCATGACCAT GCAGGGCGCC GAGGTGATCG TCGACATGGC GAACTTCTTT GCGATGGACC AGGCCGACAT GTGGGGCCCG GCGCGCTCTT ACGAGAACGG CGTTTGGCTG GTGGCCGCCA CCAAGGCCGG CTATGAGCGC TCGATCTACT ATCCGGGCGG CAGCATGATC GTCGATCCGG AGGGACGCGT GCTCTCCAAG GTGCCGTACG ACACCCACGG CCTATCGATC GCCACGATCG ATCTCGACGC CGCCGCCGAC AAGTCGATCT ACACCGCCAA CGACAAGATT GCCGACCGTC GCCCGGAGAC CTACGGCATC ATGGCGCTGC CGTATGAGAA GACCCCGGTC TATGGCGTTG CCGATCGTCC GCTGATCCCG TCGAAATCGG TGACCAAGGT GGCGGCGGTG CAGATCCACG TCACGCCGGA TTGCAGCGTC GCCGAGGTAC TCGACATGGT CGATCACACC GCCAAGCTCG GCGCCAAGGT GATCACCCTG CCCGAATACG CCTTCAGCGC GCAGTACATC CTGACGCCAG CGGAAGCCGC CTCGGCCGCC GATCAGGCCG CGGCGAACCT TGCAGCAGTG GCGAAGATCA GCGCACGCTA CGGCTGCCTG ATCGCGGCGC CGATCGTCGA GCGTGCGGCT GCCGGGCTCT ATGTGACCAC GGTGCTGATC GGCCCCGACG GCAAGGAGAT CGGCCGCTAT CGCAAGACGC ATCTCACCGC CGAGGAGCGC AAATGGGCCG TCGCCGGCTT CGACTATCCG GTGTTCGACA CGCCGTTCGG CCGCATCGGC GTGATGTCGG GCTATGACGC GGTGTTTCCG GAAACCTCGC GCTGTCTCGC GATCGGCGCG GCCGACATCA TCCTTTGGCC GGCGGCGCTG CGCGAGCCGT TCGAGCGCGA CCTTCTCGCC GTGCCGCGCG CGGAGGACAA TCGAGTCGCG GTCGTGCTCG CCAACCGGGT CGACAGCCCC TACCCCGGCG GCAGCGTGGT GATCCCGCCG ACCGGTTTCC CGCAGTGGGA CATCAACATC GCAGCCCCGC GGGTCATGAA GCTCGGCGCG GTGATGCCCA AGCATATCGA TCTGGCGGTC TGCCGGCAGA AGATGATGAT CCCGAAGGTC GACATGTTTG CAAACCGGCT GGTGGAGACG TACGCTCCCA TCGTCGCGGC GTAG
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Protein sequence | MTKRRFRAAA VQTLAKLGDF EFNIALATRY VEDAVRQGAE LIVFPECMDT GYLFDSPEHC RELAETLTDG PFVKALAALS RKHGVYIASG ITEWDPAKQK IFNTGIMFDR QGEVACHYHK QFLATHDQNW FAFGERGCPV VDTDLGKIGL LICFDGRIPE IFRAMTMQGA EVIVDMANFF AMDQADMWGP ARSYENGVWL VAATKAGYER SIYYPGGSMI VDPEGRVLSK VPYDTHGLSI ATIDLDAAAD KSIYTANDKI ADRRPETYGI MALPYEKTPV YGVADRPLIP SKSVTKVAAV QIHVTPDCSV AEVLDMVDHT AKLGAKVITL PEYAFSAQYI LTPAEAASAA DQAAANLAAV AKISARYGCL IAAPIVERAA AGLYVTTVLI GPDGKEIGRY RKTHLTAEER KWAVAGFDYP VFDTPFGRIG VMSGYDAVFP ETSRCLAIGA ADIILWPAAL REPFERDLLA VPRAEDNRVA VVLANRVDSP YPGGSVVIPP TGFPQWDINI AAPRVMKLGA VMPKHIDLAV CRQKMMIPKV DMFANRLVET YAPIVAA
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