| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3804 |
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| Symbol | |
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| ID | 6411482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4083777 |
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| End bp | 4086662 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642713685 |
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| Product | SNF2-related protein |
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| Protein accession | YP_001992778 |
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| Protein GI | 192292173 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.502587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAAT ACACGCACTA TCACAGCAAA TATTTCGCCC ATCGCATCAT GTTGCAGGGG
CGAAACGACG AAGCCTTCGC CAAGTCCCTA TCGACCGCTC GGGTCGATAT GAAGCCTCAC
CAGGTCGAGG CTGCTCGATT TGCATTGCAC TCGCCATTGT CCAAAGGCGT CATCCTTGCG
GACGAAGTCG GTTTGGGAAA AACCATCGAA GCGTGCTTGG TCATTGCCCA GAAATGGGCC
GAACGCCGTC GCCACATCCT CCTGATCGTT CCGGCATCGC TACGAACCCA ATGGCAGCAG
GAGCTTCAGC AGAAGTTCTC ATTGCCAAGT GTGGTTCTCG ACTCGAAGAC TCACCGGGAT
GCCCAGAAGG GCGGCCAGCC TCATCCCTTC GACAATCCTT CTGCGGTTGT CATCACCTCC
TATCAGTATG CCGCTCGAAA GCACGATGAA CTGCACCGCA TATCCTGGGA TCTGGTAGTC
ATCGACGAGG CGCACCGGCT ACGGAACGTC TACAAGAAGA GACAGTCCGC TCAGGCAAAG
AAGCTCCGCG ACGTACTTGC GTCTCGGTTC AAGGTGCTGC TGACCGCCAC CCCGTTGCAG
AACTCGCTGA TGGAGCTTTA TGGGCTCGTT TCTGTCATTG ATGACAGCTT CTTCGGTGAT
GAAGAATCTT TCCGCGGTAT GTATGGCCGG ACGACGGACA AGATCGCATT GCAAAGCCTT
CGGCGACGGC TGTCTCCGAT CTACAAGCGA CACCTCCGAC GCGATGTACA GGAGGCGGGT
CATGTCAGCT ATACGAAGCG GATTGCGGTG ACGTTTGACT TCGAGCCGCA CGACCGAGAA
GCACAGCTTT ACGAAGGGGT TTCGGAGTAT CTACAACGCA AAGACTCTAT AGCCTTCGGA
GCGAAGCCCA ATCAGCTCGT CCTGATCGGG GCACGCAAAA CCCTTGGCTC GTCCATCGCA
GCGATAACTC TATTTCTAGA GAATGTCATC GCACGGCTGC GCAAAAGCGA GGTCGCCGAC
GTCAGTGTCA TTGATGACAT CGATGACACG GCCGAGGTCA AGGAGGAAAT CGCGGATGAC
GTCATGCTCT CCGCGGATGC GAATGGAAAC GACGAGGATG AGAGCGATGA CCCCGCCGGC
GGACTCGATC CGAAGGCGCT CGCGGCCGAG ATTGCCGAAC TGGAAGGATA TCTCAGTCTT
GCCCGCTCTA TCGGCTCGAA TGCAAAGGGC GAGAAGTTAC TCGAACAGCT TCCCCATGTT
CTCGACGCGG TTCGAGCGCT CGGTGGTAAG CGGAAAGCGG TGATATTCAC CGAGTCTGTT
CGCACCCAGC GCTACCTCGC AGAGATTCTT TCTCAGAATG GGTACGCCGG ACAGATCGTG
CTGATGAACG GATCGAACAA CGATCCCGAG AGCCAGAAGA TCTACAAAGA ATGGAAGAAG
TCGAACGAGG GCACCGACGC GGTTTCCGGC TCAAAATCGG CGGACATGAA GACCGCGATC
GTCAACGCTT TCAAATCCGA TCAAAAGACG ATTCTGATCG CTACCGAGTC GGGGGCAGAA
GGCATCAATC TCCAGTTTTG CTCGCTCTTG ATCAACTTCG ATCTGCCCTG GAATCCGCAG
CGGGTGGAGC AGCGCATCGG CCGCTGCCAC CGTTACGGTC AAAAGATCGA TGTCACTGTG
GTGAACATGC TGAACCGCAA AAATCAGGCG GAGAAGCGAA TCTACGAACT GCTGAAGAAT
AAGTTCAACC TGTTTGAAGG CCTGTTTGGC GCCAGCGATC AGGTTCTCGG CACCATTGAA
TCGGGTATCG ATTTCGAGAA GAAGGTTTTG GCCGTTGTGC AGAGCTGCCG CAGTGAGGCG
GCAGTGCAAG AGGCTTTCGA GAAACTCGAA GAGGAGCTCG AGGAGAAGAT CAAGGCGGAT
ATGGCCGAGA CCCGCCAGCA GCTTTTCGAC ATCTTCGATG CATCCATCGT TGACGTGCTG
CGGCAGCGCG CGACGGACAT CGAGCGTACG ATGTCGGATT TCGAGCGACG TCTTTGGTTG
ATCGCCCGAG CCGAGCTTCC CAAGGCGAAG TTCCATAGCG ACGAAATCCC TCGTTTTGAA
CATGACGGAA AAATATGGTC GACCGTCTGG CCGGAGGCCG ATGAGCACGG ATGGCAGTTT
TTCCGGATGG GCGATGGCAC CCTTGCCGAC CGGTTGATCG AGGACGCCTG CGGCCGAGCC
CTTCCGGAAG CAAAGCTCGT ATTCGACTAC AAGGCCTATC GAAGTGAAGG GCTACCTCGC
CTGTCCGACA TCGAACAGGT TTCAGGAAAG GCGGGATGGC TCAAGGTGTC CGTCCTACGG
GCAGAGACGG CCCTTGGATC GAGGGACAGC ATCGTGCTCG CGGCGACGAC GGACGATGGG
CATGTTCTCG CCAAAGATAC GGCGGAGCGG CTTTTCCAAG TGCCGGCCAT CACCGATGCG
ATCGACGCGG CCTATCCAGG GAAGGCGATG GCGGCGATCG ACGGTGAGGC CATGAAGGCG
GCTCAGCAGG AAGCCGAGAA CCAAAGCCGG AATTGGCTCG ACGAGGAAAC CGCAAAATTG
GAAGCCTACG CCGAGGATCT GGAGAGTGCC AACAAGCGCC GGGAGAGGGA TCTCAAAGCG
GAGGCTGACG CAGCCAAACG TGCCCTTCGA GGCAATCAGT CAATGCCGCT CGCCGAGAAG
ATCGAGGAAG AGCGCCGGAT CAAGAAACTG GAGCAGGAAC GCGACGACTT GGTGTTCGAT
AGTTTCAAGA AGTTGCGGGA AATACGAAGA GAAATCGACG ACAAACTCAA TGATGTTTCT
GCCAAATTGG CGATCACACC GAAGATAACG CCTCTTATGA CGATCCGTTG GGAACTGACG
GCATGA
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| Protein sequence | MSEYTHYHSK YFAHRIMLQG RNDEAFAKSL STARVDMKPH QVEAARFALH SPLSKGVILA
DEVGLGKTIE ACLVIAQKWA ERRRHILLIV PASLRTQWQQ ELQQKFSLPS VVLDSKTHRD
AQKGGQPHPF DNPSAVVITS YQYAARKHDE LHRISWDLVV IDEAHRLRNV YKKRQSAQAK
KLRDVLASRF KVLLTATPLQ NSLMELYGLV SVIDDSFFGD EESFRGMYGR TTDKIALQSL
RRRLSPIYKR HLRRDVQEAG HVSYTKRIAV TFDFEPHDRE AQLYEGVSEY LQRKDSIAFG
AKPNQLVLIG ARKTLGSSIA AITLFLENVI ARLRKSEVAD VSVIDDIDDT AEVKEEIADD
VMLSADANGN DEDESDDPAG GLDPKALAAE IAELEGYLSL ARSIGSNAKG EKLLEQLPHV
LDAVRALGGK RKAVIFTESV RTQRYLAEIL SQNGYAGQIV LMNGSNNDPE SQKIYKEWKK
SNEGTDAVSG SKSADMKTAI VNAFKSDQKT ILIATESGAE GINLQFCSLL INFDLPWNPQ
RVEQRIGRCH RYGQKIDVTV VNMLNRKNQA EKRIYELLKN KFNLFEGLFG ASDQVLGTIE
SGIDFEKKVL AVVQSCRSEA AVQEAFEKLE EELEEKIKAD MAETRQQLFD IFDASIVDVL
RQRATDIERT MSDFERRLWL IARAELPKAK FHSDEIPRFE HDGKIWSTVW PEADEHGWQF
FRMGDGTLAD RLIEDACGRA LPEAKLVFDY KAYRSEGLPR LSDIEQVSGK AGWLKVSVLR
AETALGSRDS IVLAATTDDG HVLAKDTAER LFQVPAITDA IDAAYPGKAM AAIDGEAMKA
AQQEAENQSR NWLDEETAKL EAYAEDLESA NKRRERDLKA EADAAKRALR GNQSMPLAEK
IEEERRIKKL EQERDDLVFD SFKKLREIRR EIDDKLNDVS AKLAITPKIT PLMTIRWELT
A
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