Gene Rpal_3734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3734 
Symbol 
ID6411412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3997589 
End bp3998437 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID642713616 
Producttransglutaminase domain protein 
Protein accessionYP_001992709 
Protein GI192292104 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCATTC GCGCGGGCTA CAATATCGCA TTTCAGTGTT TCCAGGAGAC GCCGATCAAC 
CTGCTGCTGA GCGTGCATCC GTCGCGCGCC CAGCATGTGA TCGGCGAGCA TGTCATCAAG
TTTTCGCCGG ACGTGCCCTC CCACGACTTC ACCGACATGT TCGGCAACGT CTGCACCCGG
ATCGTGGCGC CGGCCGGCCG CATCGATATC AGCAACGACT TCCTGATCGA GGATTCCGGC
CTGCCCGACC AGGTCGCCCC CGGCGCCCGC GAGATCCCGG TGGCCGAGCT GCCCGACGAG
GTGATGGTGT ATCTGCTCGG CAGCCGCTAC TGCGACACCG ACAAGCTGGC GACCCTGGCG
TGGTCGATGT TCGGCGGCAT CCCCTCGGGC TGGCAGCGCG TGCAGGCGAT CGTCGACTAC
GTCCACAACC ACATCACCTT CGGCTATCAG TTCGCCCGCA ACGACCGCAC CGCGTCCGAG
GGACACGCCG AGCAGATCGG CGTCTGCCGC GATTTCGCGC ATCTCGCAGT GACGCTGTGC
CGCTGCATGA ACATTCCGGC GCGCTACTGC ACCGGCTATC TCGGCGACAT CGGCGTGCCA
CAGGATCCGG CGCCGATGGA CTTCTCCGCG TGGTTCGAAG TCTATCTCGA CGGCCGCTGG
TACACCTTCG ACGCGCGCCA CAACCATCCG CGGATCGGCC GCATCGTCAT CGCCCGCGGC
CGCGACGCTG CCGACGTCGC GATCTCCACG TCGTTCGGCA CCGCGAACCT GCTGAACTTC
GAGGTGATCA CCCACGAGGT GACGGATCAA GCCGCAGTGA CGGACGCCCG GCTGCAGAAG
GTCGCGTGA
 
Protein sequence
MIIRAGYNIA FQCFQETPIN LLLSVHPSRA QHVIGEHVIK FSPDVPSHDF TDMFGNVCTR 
IVAPAGRIDI SNDFLIEDSG LPDQVAPGAR EIPVAELPDE VMVYLLGSRY CDTDKLATLA
WSMFGGIPSG WQRVQAIVDY VHNHITFGYQ FARNDRTASE GHAEQIGVCR DFAHLAVTLC
RCMNIPARYC TGYLGDIGVP QDPAPMDFSA WFEVYLDGRW YTFDARHNHP RIGRIVIARG
RDAADVAIST SFGTANLLNF EVITHEVTDQ AAVTDARLQK VA