| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3679 |
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| Symbol | |
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| ID | 6411355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3928846 |
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| End bp | 3930975 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713559 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001992654 |
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| Protein GI | 192292049 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.170843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCG ACGCCTACAG AATTCGCGTA GAAGGCATGG ATTGCGCCTC CTGCGCGCTC
AAGATCGAGA CCGCGATGCA GCGGCTCTCG GGTGTCGCGG ATGTTCGCGT CAGCTACTCC
GCTGGCACCT TGGCGCTTCG GCTTGATCGG GACAGGATTT CGCCGAGCAC CATCGACGAA
CAGCTTCGCT CACTTGGTTA CCGACCGCTG GCGGTCGCGT CGTCGCCAAG CAGCATCGCG
ACCGACCGAA AACGACTGCC ATGGTGGCAG GACGCGAAGC TGCAATCGGT CATGATCGCA
GCGGCGGTTT TTGCTCTGGC GTTCGCCTTA TCGCAGCTCT TTCCGGCCTT CGAGCGATGG
CTCTATTCCG CGGCGGCCGC GATTTGTCTG ATCCCGATCG CCCGCCGGGC CTTGATCGGC
ACGCGTTCGG GATCTCCCTT CAGCATCGAA ACGCTGATGA GCGTTGCGGC GATCGGAGCT
GTCATGATCG GTGAGGCCGC GGAAGCGGCC GTGGTCATCG TTCTGTTCAG CGTCGGCGAA
TGGCTGGAGA CTTTCGCGGC GGGGCGCGCG CGATCCGGGA TTGAAGCCCT GATCGACGTG
GTGCCACGCA CAGCGAGGCG ACTGCGCGAT GGTTCAGATG AAGTCGAGGA GATCCCGGCT
GCCGACCTTA TGATCGGCGA TGTGGTGGTG GTGCGTCCCG GCGACCGCAT CCCGTCGGAC
GGCAAGGTCA TCGACGGCGA CTCTGACGTG AACGAAGCAC CGATCACCGG CGAGTCCGTG
CCGGTCGCCA AGGCGGTCGG CGATCACGTC TATGCCGGCA GCATCAACGC GAACGGCGAG
CTGCGCATCG AGACGACGAA TGCGGCGGCC GACAACACGA TCGCGAGCAT CATCCACCTC
GTCGAAGAAG CGCAGGAGAC CAAAGCGCCG ACGGAGCGGA TGATCGATCG TCTCAGCCGG
TGGTACACGC CCGCCGCCAT GCTGGTGGCG CTCCTTGTCA TCATCGTGCC GCCGCTCGGC
TTCGGCGAGG ATTGGGCGAC CTGGATCTAC CGCGGACTCG CCACGTTGCT GATCGCCTGC
CCATGTGCAC TTGTCATTTC GACACCGGCG GCCATCGCTT CCGGTCTTGC GGCGGGCGCC
CGCAAAGGGC TGCTCATCAA GGGCGGTGCG GTGCTGGAAA CGCTCGGCAA GGTGAAGACC
GTCGCCTTCG ACAAGACAGG CACGCTGACG CTGGGGCAGC CTCAAGTGAC CGACGTGGTT
TCCGTCATCG GCCAGGACGA CGCTGTGCTC GCGCGCGCCG CGGCTGTCGA AGGCAACACC
AGTCATCCGA TCGGACAGGC GATTGTCCGC GCCGCGAAGG CGCGCGCACT GCAGACCCCC
GTCGTGTTTG GCGGGAGTCA GGCGGTGCCA GGCAAGGCGA TCTCCGCGCG GCTGAAAGAC
GGCTTTGCCT TCGTCGGGTC TCCGCGCTTT GCCGCCGAGC GGACCACGAT TCCGCCGGAG
CTTGCGGCGA CGATCTCCGG TCTCGAGCAC GAAGGTAAGA CGGTCGTGGT GCTCATCTCT
AGCAAGACGT GCGAGGGAGT GATTGCGCTG CGCGACGAGC CGCGCCCGGA TGCGGCAGGA
GCTTTGCGGC AACTGACGTC CAAAGGCATC GCGGTGGTTA TGCTGACGGG CGACAACGTG
CGAACCGCTC AGGCCATCGC CCGCCAACTC GGCATCGAGG CTCGTGCTGA GCTTCTGCCC
GACGCCAAGC TGGCTGAGAT TTGTCGCCTG AAGGAAGTGT CGCCCGTAGC GATGGTCGGC
GACGGCATCA ATGATGCGCC GGCGCTCGCG GCCGCTTCCG TCGGCATCGC CATGGGAGGA
GGAACGGACG TGGCGCTGGA GACCGCCGAC GCGGCGCTGC TGAACGACCG CACCCGTGGC
GTCGTGGAAT TGATTGCGCT GTCGCAGGCG ACGCTCGGCA ACATCTGGCA GAACATCTCG
ATCGCGCTCG GGCTGAAAGC GGTGTTCCTC GCCACCAGCC TCCTAGGCGT GACGACGTTG
TGGATGGCGA TCCTCGCCGA CACCGGCGCC ACCGTCCTGG TCACCGCGAA CGCCCTCAGA
TTGCTGCGGT GGCGGGCGTC GGAGTCATGA
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| Protein sequence | MATDAYRIRV EGMDCASCAL KIETAMQRLS GVADVRVSYS AGTLALRLDR DRISPSTIDE
QLRSLGYRPL AVASSPSSIA TDRKRLPWWQ DAKLQSVMIA AAVFALAFAL SQLFPAFERW
LYSAAAAICL IPIARRALIG TRSGSPFSIE TLMSVAAIGA VMIGEAAEAA VVIVLFSVGE
WLETFAAGRA RSGIEALIDV VPRTARRLRD GSDEVEEIPA ADLMIGDVVV VRPGDRIPSD
GKVIDGDSDV NEAPITGESV PVAKAVGDHV YAGSINANGE LRIETTNAAA DNTIASIIHL
VEEAQETKAP TERMIDRLSR WYTPAAMLVA LLVIIVPPLG FGEDWATWIY RGLATLLIAC
PCALVISTPA AIASGLAAGA RKGLLIKGGA VLETLGKVKT VAFDKTGTLT LGQPQVTDVV
SVIGQDDAVL ARAAAVEGNT SHPIGQAIVR AAKARALQTP VVFGGSQAVP GKAISARLKD
GFAFVGSPRF AAERTTIPPE LAATISGLEH EGKTVVVLIS SKTCEGVIAL RDEPRPDAAG
ALRQLTSKGI AVVMLTGDNV RTAQAIARQL GIEARAELLP DAKLAEICRL KEVSPVAMVG
DGINDAPALA AASVGIAMGG GTDVALETAD AALLNDRTRG VVELIALSQA TLGNIWQNIS
IALGLKAVFL ATSLLGVTTL WMAILADTGA TVLVTANALR LLRWRASES
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