| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3677 |
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| Symbol | |
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| ID | 6411353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3926656 |
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| End bp | 3927534 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713557 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001992652 |
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| Protein GI | 192292047 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.307485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCG ACGACCTCGA GATCTTCCGC GCCGTCGTCA GGGAGGGCGG GGTCACCCGC
GCGGCGGACC GGCTGCACCG GGTGCCGTCC AACGTCACCA CCCGCATCAA GCAATTCGAG
GAGCGGATCG GGCACAGCCT GTTTCGCCGG CAGGGGCGCG GTCTGGTCCT CACCGATGTC
GGCCGCACCC TGCTGAGCCA CGCCGAACGT CTGCTGCAGA TGGCCGATGC CGCCGAGCAG
GAGTTGCGGA GCGGGAAGGC GAAGGGCGTG CTGCGGCTGG GGTCTTTGGA AAGCGCGGCC
GGGGTGCGGC TGCCGCCGCT GCTCTCGCGC TTTCATGCGC GCTATCCCGA CGTCGCGATC
CAGATGACGA CTGACACCAC CGGCGCGCTG CTCCGGCAAT TGGAGCGGTT CGAGATCGAC
GCCGCGTTCG TCTCCGAACC GTTCGAGCCG GGTAGCTTCG CCTCAGTTGC TGCGTTCAAC
GAAGAACTGG TGCTGATCAC CGCCAAGGGC GACCGCCCGC TGCGCCGCTC CGCCGACCTC
GGCGGCAAGA CCGTGGTGGC GTTTCCGCAC GGCTGCTCCT ACCGCCGGCG CCTGATGGAA
TGGCTGGCAT CCGAAGGCGT ATCGCCCGAC CGAATTCTCG ACCTCGGTTC GTATCACGCC
ATCGTCGCCT GCGTCGCGGC CGGCTCCGGC ATCGCCATCG TGCCCGCAGG CGTGCTCGAT
CACGCCGCCT TGGGCACGGC GGTGGATCGC CACCCGCTGC CGGCCAAGCT GCGAAACAAC
CGGACGCATC TGGTGTGGCC CGGCGACCCC GGCTCGCCGC TGCAAGCCCT GATGGCGCTG
CTTCCGAATG CGGGTGCAAA GCGGCGGGGC GGTGGATAG
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| Protein sequence | MDLDDLEIFR AVVREGGVTR AADRLHRVPS NVTTRIKQFE ERIGHSLFRR QGRGLVLTDV
GRTLLSHAER LLQMADAAEQ ELRSGKAKGV LRLGSLESAA GVRLPPLLSR FHARYPDVAI
QMTTDTTGAL LRQLERFEID AAFVSEPFEP GSFASVAAFN EELVLITAKG DRPLRRSADL
GGKTVVAFPH GCSYRRRLME WLASEGVSPD RILDLGSYHA IVACVAAGSG IAIVPAGVLD
HAALGTAVDR HPLPAKLRNN RTHLVWPGDP GSPLQALMAL LPNAGAKRRG GG
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