Gene Rpal_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3620 
Symbol 
ID6411296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3876674 
End bp3876949 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content65% 
IMG OID642713500 
Producttype III secretion protein 
Protein accessionYP_001992595 
Protein GI192291990 
COG category[S] Function unknown 
COG ID[COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB 
TIGRFAM ID[TIGR00789] flhB C-terminus-related protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.514646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACAA CAGACACCAA GAATCCGCTC GCGATCGCCC TGCACTACGA CTATGCCGGG 
GCTCCGCGCG TGGTCGCCAA GGGCAAGGGC GTGCTCGGCG CCAAGATCAT CGAAGTCGCC
AAACAGCACG ACATCCCAAT CGAAGAGAAC GAGATGCTCG CCGGAGCGCT GTCGCACGTC
GAGCTCGGCG ACGAAATCCC CGAGGAGCTG TACAAGGCGG TGGCTGAGGT TCTGGCCTTT
GTGCTGCGGC TGTCGGGGCG CGGCCCGGTG CGCTGA
 
Protein sequence
MTTTDTKNPL AIALHYDYAG APRVVAKGKG VLGAKIIEVA KQHDIPIEEN EMLAGALSHV 
ELGDEIPEEL YKAVAEVLAF VLRLSGRGPV R