Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3620 |
Symbol | |
ID | 6411296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3876674 |
End bp | 3876949 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642713500 |
Product | type III secretion protein |
Protein accession | YP_001992595 |
Protein GI | 192291990 |
COG category | [S] Function unknown |
COG ID | [COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB |
TIGRFAM ID | [TIGR00789] flhB C-terminus-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.514646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACAA CAGACACCAA GAATCCGCTC GCGATCGCCC TGCACTACGA CTATGCCGGG GCTCCGCGCG TGGTCGCCAA GGGCAAGGGC GTGCTCGGCG CCAAGATCAT CGAAGTCGCC AAACAGCACG ACATCCCAAT CGAAGAGAAC GAGATGCTCG CCGGAGCGCT GTCGCACGTC GAGCTCGGCG ACGAAATCCC CGAGGAGCTG TACAAGGCGG TGGCTGAGGT TCTGGCCTTT GTGCTGCGGC TGTCGGGGCG CGGCCCGGTG CGCTGA
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Protein sequence | MTTTDTKNPL AIALHYDYAG APRVVAKGKG VLGAKIIEVA KQHDIPIEEN EMLAGALSHV ELGDEIPEEL YKAVAEVLAF VLRLSGRGPV R
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