| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3600 |
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| Symbol | |
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| ID | 6411276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3852237 |
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| End bp | 3854939 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713480 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001992575 |
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| Protein GI | 192291970 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.182555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACG CTGTTTCATC GTTCATCCAG AGCGTGAGGA CACGGACGCT CTCGATCGGA
CAGATGACGT TCGGCAGCTT TCTGTTGCTG CTGACGATCA TCGCCGCCAC CTCTATCGGC
AGCGTGGTGG CGATCCGGCA TATCGACCGC ACCTTCGGCG AGTTGCAGCG GCTGCAAAGC
GTCGGCGACC TCGCCGAAGA GATCGAACGG CGGATGAGCG ATCTGCGCTT CGCCGCTCGG
CAAGCGGTGA CCGAGCCGGC CGCGCAGCCC GCCGGCAAGG TGTTCACCGC CGCGTCCGCG
CTCACTGAAC TTCTGAAGAA GACCCGTCTG GAACTGGCGC CGGATCAGCA GGAGATGCTC
GACGGCGTCA CCGAGCGTCT GACCAATTAT CGCGACGGCC TTCAGCGCAT CACCGAGCTG
ATGCAGCGCC GCGGCGAGCT GGTGGCGAAG ATCCCGGCGC TGCGCGAGGC CTTCGAGGCC
ACGATCGCCG GCTTGTCCGA TCGCAAGCTC GCCAGCGATC TGCATTCGGC CCAGATCAAG
GTCGGCGCCG CGCTGCTGTC ACGCGACCTG ATGGGCGCCA GCGACGCGGC ACGCCGGATG
CGGGCGCTGC CGATCAGCGA TGCCGCCGCG GCCCGTTCGG TGCGCGACTA CGCCGAGCTG
ATCGCCTCGA CCGCGGCGGT GGAGCAGGAG ATCGCCGATC TCGATCGCGA CGTGCTCGGC
ACCGAGGGCC GGCTGATCGG CAAGGTCACC GAGCTGCTGC GTGATGCCGC CGCCCGCCGC
GGCCGGGTGC TGTCGCGCGA TCTCGCCCGT ACGCTCGCCG AAGACAAGTG GCAGAGCATC
GTGCTCGGCA TCGCCGGCGT GCTGGTCGGC TGGATGGCGG CGGCGTTCGT GGTCCGCCGC
ACCGTCGGAC CGCTGACGGC GATTACCCGG GCAATCCGCT CGCTGGCGGC GGGGCAGCAA
TACACCGCGA TCCCGGCGAC CGACGTGAAG AACGAGATCG GTGATATCGC CCGTGCCGCC
GAAGTGTTCC GCCGCACGCT GGTCGATGCC GACAACGCGC GCGAGGCCGC GGTGCGGGCG
CTCGCCGAAC AACGGCTCGC CGAGGAAAGC TACCGCAAGC TGTTCGAAGG CTCGATCGAC
GGCATCTATG TGACCACGCC CGACGGCGCG CTGCTCAACG CCAATCCGGC GCTGGCCCGG
ATGATGGGCT ACGACAGCCC GGCCGAACTG ATCCGTGCCA CAGCCGACGT CTCCACAACG
ATCTATCTCG ATCCCGCCAA GCGTGAGGAA TATCGCGAGC TGATGCAGCG CGACGGCATG
GTGCGCGAAT TCGAGTATCA GGCGCGCAAA CGTAGCGGCG ATGTGCTGTG GCTGTCGGAC
AGCGCCGGCG CGGTCCGCGA TGAGGCCGGC AACGTGATCC GCTACGAAGG CGCGGTGCGC
GACATCACCG ATCAGAAGCG CGCCGAGCAG GCGGTTGCCG CAAGCCGGCT GCTGCTGCAG
CAGGTGATCG ACACCGTTCC GGCGGTGATC AACGTCAAGG ATACCGAGCT GCGCTACGTG
CTGATGAACC GCTACATGGC GGGGGTGTTC GGCATCCATC CGCGCGACGC GATCGGCCGC
ACCACCGCGG AGCTGATGTC GCGGTTCGGC TCGCACAAGA CCGACGCCAA CGACAAGCGC
GTGCTCGCGA CCGGCGAGGG GCTCGGCTTC TACGAGGAGG AGTACCGCGA CGCGACCGGA
GCGACGCGGC AGTGGCTGGT CAACAAGATG CCGCTGAAGG ACGCCGACGG CGAGATCGAG
CGGATCGTCA CGGTGGCGCT GGATATCGGC GAGCGCAAGC GCGGCGAGCT CGAGATGCGC
CAGGCCAAGG ACGCGGCGGA AGCGGCGCTG CGCAACCTGC GCGAGACCCA GCAATCGCTG
ATCGAAGCTG AAAAGCTCGC AGCCCTCGGC CGGCTGGTGG CGGGCGTTGC GCATGAGGTC
AACAACCCGG TCGGCATCAG CCTGACGGTG GCCTCGGCGC TGGAGCGTAA GGCGGCGGTG
TTTGCCACCG AGGTCGCGCG CGGCGAGCTG AAGCGCTCGC GCCTCAACGA GTTTCTGGAA
ACGACGCGCG ATGCCTCGTC ACAGCTCGTC GCCAATCTCA ACCGCGCCGC CGAGCTGATC
CAGTCGTTCA AGCAGGTCGC GGCCGACCGC AACTACTCGG ACCAGCGGCT GTTCGATCTC
GGCGATCTCA CCGAGCAGGT GGTGATGAGC CTGCGGCCGG GCCTGCGCAA ACACAATCTG
ACGCTGAACG TCGAGTGCCA GCCCGGCCTG ATGATGAATT CCTATCCGGG CCCCTACGGG
CAGGTGCTGA CCAACCTGTT TCTGAATTCG GTGGCGCACG CGTTTCCGAA CGGGCGCGCC
GGCACGGTCG AGATCGAGGT GCGCGCGGCC GGCAACGATC ACGTCGTGGT CGCGTATTCC
GACGACGGCT GCGGCATGAG CCTCGACGTC CGCCGCCGCG CCTTCGATCC GTTCTTCACC
ACGCGGCGCG ACCAGGGCGG CACCGGCCTC GGCCTGCACA TCGTCTATAA CATCGTCACC
AACCGGCTTG GCGGCCGGCT CGAACTCGAT TCCGAGCCCG GCAACGGCAC GCGCATCCTG
ATGACGCTGC CGCGGACCGC GCCGCAGGAG CGCGCCGAGC TGTCAGCGGC GTCGGGCTCG
TAG
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| Protein sequence | MPNAVSSFIQ SVRTRTLSIG QMTFGSFLLL LTIIAATSIG SVVAIRHIDR TFGELQRLQS
VGDLAEEIER RMSDLRFAAR QAVTEPAAQP AGKVFTAASA LTELLKKTRL ELAPDQQEML
DGVTERLTNY RDGLQRITEL MQRRGELVAK IPALREAFEA TIAGLSDRKL ASDLHSAQIK
VGAALLSRDL MGASDAARRM RALPISDAAA ARSVRDYAEL IASTAAVEQE IADLDRDVLG
TEGRLIGKVT ELLRDAAARR GRVLSRDLAR TLAEDKWQSI VLGIAGVLVG WMAAAFVVRR
TVGPLTAITR AIRSLAAGQQ YTAIPATDVK NEIGDIARAA EVFRRTLVDA DNAREAAVRA
LAEQRLAEES YRKLFEGSID GIYVTTPDGA LLNANPALAR MMGYDSPAEL IRATADVSTT
IYLDPAKREE YRELMQRDGM VREFEYQARK RSGDVLWLSD SAGAVRDEAG NVIRYEGAVR
DITDQKRAEQ AVAASRLLLQ QVIDTVPAVI NVKDTELRYV LMNRYMAGVF GIHPRDAIGR
TTAELMSRFG SHKTDANDKR VLATGEGLGF YEEEYRDATG ATRQWLVNKM PLKDADGEIE
RIVTVALDIG ERKRGELEMR QAKDAAEAAL RNLRETQQSL IEAEKLAALG RLVAGVAHEV
NNPVGISLTV ASALERKAAV FATEVARGEL KRSRLNEFLE TTRDASSQLV ANLNRAAELI
QSFKQVAADR NYSDQRLFDL GDLTEQVVMS LRPGLRKHNL TLNVECQPGL MMNSYPGPYG
QVLTNLFLNS VAHAFPNGRA GTVEIEVRAA GNDHVVVAYS DDGCGMSLDV RRRAFDPFFT
TRRDQGGTGL GLHIVYNIVT NRLGGRLELD SEPGNGTRIL MTLPRTAPQE RAELSAASGS
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