| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3559 |
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| Symbol | |
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| ID | 6411233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3809710 |
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| End bp | 3811467 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713437 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001992534 |
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| Protein GI | 192291929 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCGCA ATATTTCCTT CAGCTCGCGC GCGCTGCGAG TTTGCGTGCT CGGCTTGGCG
ACGATCTCAG CCGCGGTGAT CTTTACAACC GACACAGCCG ACGCCCGGAA GCGGCATCGT
CACCATCACG CCCGCCACCA CGTCGAGCGC AACAGCTACA ACCCCGCCTT CGCCTCGATC
ATCGTCGACG GCAATACCGG TGCGGTTCTC ACCGCCACCA ACCCCGACAG CCTCCGTCAT
CCGGCGTCGC TGACCAAAAT CATGACCCTG TACCTGCTGT TCGAGAAGCT CGAACAGGGC
AAACTCAGCC TCGACAGCGA GATGGAAGTT TCCGAGCACG CCTCCGAGCA GGCACCGACC
AAGCTCGGCT TGCGCCCCGG CTCGACGCTG CGGGTCGAGG ACGCCATCAA GGGCCTGGTG
ACGCGCTCGG CCAACGACGC CGCCGTGGTG ATCGCCGAGA CCGTCGGCGG CAGCGAGTCC
GACTTCGCCA AGCTGATGAC CCGCAAGGCG CGGGCGCTCG GCATGTCGCG CACCGTGTAC
CGCAACGCCT CGGGCCTGCC GAACGACGAG CAGGTCACCA CCGCGCGGGA CCAGTCGATC
CTCGGCCGCG CGATCCAGGA CCGCTTCCCG CGCTACTACC GCTATTTCGC GACCTCCGTC
TTCAACTATC GTGGCCACGC CATCCGCAAC CACAATCGCC TGCTCGGCAA TGTCGAAGGC
GTCGACGGCA TCAAGACCGG CTACACCCGC GCCTCCGGCT TCAACCTGGT CACCTCGATG
CACCGCGGCA ACCGCTTCCT GGTCGGCGTC GTGCTGGGCG GCCGTAGCGG CGGCTCGCGC
GACGCCATCA TGCGCAACCT GCTGGCCGAG AATCTGGAAA AGGGCGCGAC GCGCCGCACC
GTTGCCGCCA TCAGCGAACG CTCCTCCGGT TCGGACGAGA CCGAGGTCGC CGAGGATACC
CGTCCGGCGC CGGCGGTTCA GGTGCAGGGC GCCGTTCAGG TCGCCTCCGC CGCCCCGGAA
GCCGCCGCCG TTCCGGTCCC CCGCCCGGCT GCGCCGATGA CCCGCTCGGT CGCCGCGCCG
GAGCCCAAAG CCGAAGCCAA GCCGGAGCCC GGCCCGTTCA ACAGCGGCAG CCTGGACTCC
AAGCCGCTGC AGATCATTCC CGGCTCGGCC GAGCCGATGA AGCCGGTCCG GGTCAAGACG
GTCCAGGTCA AATCCGCCCC GATCAAGCTC GCTTCCGCGG TCGCCGCTCC TCCCGTCACC
AACGCCATCC CGTTGCCCCG CCAGAATCCG GCCGAAACTT CCAGCGCCGC GGTCGCCCGT
GTCGAAGCCC GCCCCGAAGT GATCCAGCAG CCGGCCGGTC ACGGCACCGG CCAGGGCATC
CTCGGCGTGC TGCCTGGTAA CATGGCGCCG AAGCACTCGC AGGCGATGGC CTATGCCGAC
CCCGCACCGG CGGCCCCGGC CCCAGCGGCT CCGGCAGTTC AGCAGAACGG CGCGATCAAG
ACCGTCGCCC ATAGCGGCTG GATCATTCAG GTTGGCGCGC TGGAAAGCGA GCCGGAAGCC
CGCAAGCGCC TCGAGGCCGC CCGCGAGCAG GCCAGCGGCC TGCTCGGCAA GGCTGATCCG
TTCACCGAGA CCGTGACCAC CAAGGGCGAC CGCAAGCTTT ATCGGGCGCG CTTTGCTGGG
CTGGAACGTG ATGAAGCCGA GGCGGTGTGC CGCAAGCTGA AGCGCTCCGA CATCTCCTGC
TTCACCATCA AGAACTGA
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| Protein sequence | MHRNISFSSR ALRVCVLGLA TISAAVIFTT DTADARKRHR HHHARHHVER NSYNPAFASI
IVDGNTGAVL TATNPDSLRH PASLTKIMTL YLLFEKLEQG KLSLDSEMEV SEHASEQAPT
KLGLRPGSTL RVEDAIKGLV TRSANDAAVV IAETVGGSES DFAKLMTRKA RALGMSRTVY
RNASGLPNDE QVTTARDQSI LGRAIQDRFP RYYRYFATSV FNYRGHAIRN HNRLLGNVEG
VDGIKTGYTR ASGFNLVTSM HRGNRFLVGV VLGGRSGGSR DAIMRNLLAE NLEKGATRRT
VAAISERSSG SDETEVAEDT RPAPAVQVQG AVQVASAAPE AAAVPVPRPA APMTRSVAAP
EPKAEAKPEP GPFNSGSLDS KPLQIIPGSA EPMKPVRVKT VQVKSAPIKL ASAVAAPPVT
NAIPLPRQNP AETSSAAVAR VEARPEVIQQ PAGHGTGQGI LGVLPGNMAP KHSQAMAYAD
PAPAAPAPAA PAVQQNGAIK TVAHSGWIIQ VGALESEPEA RKRLEAAREQ ASGLLGKADP
FTETVTTKGD RKLYRARFAG LERDEAEAVC RKLKRSDISC FTIKN
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