Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3544 |
Symbol | |
ID | 6411218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3793292 |
End bp | 3794587 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642713422 |
Product | DNA polymerase IV |
Protein accession | YP_001992519 |
Protein GI | 192291914 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGCG ACGACCCGGG CCGACGGACG ACACCCGGCT TCTGCCGGGA CTGCCTCGCC GACCAGCGCG CCGAGGCGCG GCGCTGCGCG GCCTGCGGCT CGCCGCGCCT GCTGCGGCAC CGGTCGCTCG GGACTCTGTC GCTCGCCCAT ATCGACTGTG ACGCGTTCTA TGCGACGGTC GAGAAGCGCG ACAATCCGGC GCTCGCCGAC AAGCCGGTGA TCGTTGGCGG CGGCAAGCGC GGCGTGGTGT CGGCGGCCTG CTACATCGCC CGCACCTTCG GGGTGCGCTC GGCGATGCCG ATGTTCAAGG CGCTGGCGCT GTGCCCGTCG GCGACCGTGG TGCGGCCAGA CATGGCGAAG TACGTCCGGG TCGGACGCGA GGTGCGGCAG GCGATGCGCG CGCTGACGCC GCTGGTCGAG CCGCTGTCGA TCGACGAAGC ATTCCTCGAT CTGGCCGGCA CCGAGCGGAT GCACGGCATG ATCCCGGCCA AGGTGCTGGC GAAATTCGCC CGTGAGGTCG AGCGCGACAT AGGCGTCACC GCGTCGGTCG GACTGTCGTG CAACAAGTTC ATGGCCAAGA TCGCATCCGA TCTCGACAAA CCGCGCGGCT TCGCGGCACT CGATCAGGAC GAAGCCCGCG AGATGCTGGC GCCTCGGCCG GTCGGCTTCA TCTTCGGCGT CGGTCCGGCG ACGGCATCGC GGCTGGCGAG CCGCGGCTTC CGCACCATCG CCGACCTGCA GCGCGCCGAC GAAATCGAGA TGATGCGGCA GTTCGGCGAC GAAGGACGGC GGCTGTGGCG ACTGGCGCGC GGCATTGACG GCCGCAAGGT GGTGCCCGAT CGCGGCGCCA AATCGATCTC CAACGAGACC ACCTTCGAGG ACGACATTCG CGACCTCGCG ACGCTGGAGA AGATCTTGTG GCGGCTGTCG GAGAAGGTGT CGTCGCGGCT GAAAAGCGCC GCCCTCTCCG GCTCGACCAT CACGTTGAAA CTGAAGACCG CCGACTTCCG CCAGCGGACC CGGGCGCAGA CCATCCATGC GCCGACCCAG ATGGCGAACC GGATCTTCTC GGTGTCGCGT GAGATGCTCA GCAAGGAAGT CGATGGCACC GCATTCCGCC TGATCGGCAC CGGCGTCAGC GCTCTAACCG AGCAAACCGG CCCGACCGAA GACGATATGC TCGACCGCCG CTCAGCCCAC GCCGAACGCG CAATCGACGA TCTGCGCAAG AAGTTCGGCG ACGCCGCCGT GATCCGCGGC ATCGCGTTCG ATCGGGCGCA GAAGCCGCAG GGATGA
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Protein sequence | MSGDDPGRRT TPGFCRDCLA DQRAEARRCA ACGSPRLLRH RSLGTLSLAH IDCDAFYATV EKRDNPALAD KPVIVGGGKR GVVSAACYIA RTFGVRSAMP MFKALALCPS ATVVRPDMAK YVRVGREVRQ AMRALTPLVE PLSIDEAFLD LAGTERMHGM IPAKVLAKFA REVERDIGVT ASVGLSCNKF MAKIASDLDK PRGFAALDQD EAREMLAPRP VGFIFGVGPA TASRLASRGF RTIADLQRAD EIEMMRQFGD EGRRLWRLAR GIDGRKVVPD RGAKSISNET TFEDDIRDLA TLEKILWRLS EKVSSRLKSA ALSGSTITLK LKTADFRQRT RAQTIHAPTQ MANRIFSVSR EMLSKEVDGT AFRLIGTGVS ALTEQTGPTE DDMLDRRSAH AERAIDDLRK KFGDAAVIRG IAFDRAQKPQ G
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