| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3527 |
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| Symbol | pyrB |
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| ID | 6411201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3774175 |
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| End bp | 3775128 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713405 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001992502 |
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| Protein GI | 192291897 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.356132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCCG CCCCAAAATC GACTTTCGTC CTCGGTCACC GGCATCTGCT GGGAATCGAA
GGGCTTTCCG CCGCCGACAT CTCCGGCCTG CTCGACCTCT CCGAGGAGTA TGTCGAGCTC
AACCGGCAGG TCGACAAAAA GCGCACCAGT TTGCGCGGCC GCACCCAGGT CAATCTGTTC
TTCGAGGCGT CGACCCGGAC GCAGTCGTCG TTCGAGATCG CCGGCAAACG CCTCGGCGCC
GACGTGATGA ACATGAGCGT GTCATCATCG TCGATGCGCA AGGGCGAGAC CCTGATGGAC
ACCGCGGTGA CGCTGAACGC GATGCACCCG GACATCCTGG TGGTCCGGCA TCATGCCTCC
GGCGCCGTGG AACTGCTCGC CCGCAAGGTC GACGGCTCGG TGATCAACGC CGGCGATGGC
GCCCACGAGC ATCCGACCCA GGCGCTGCTC GACGCGCTGA CGATCCGCCG CAACAAAGGA
CGGCTCGAAG GGCTGGTGGT GGCGATCTGC GGTGACGTGA TGCATTCGCG CGTCGCCCGC
TCCAACATCC TGCTGCTGAA CACCATGGGC GCCCGCGTCC GCGTCGTCGC TCCCTCCACG
CTGCTGCCGG CCGGGATCGA GCGGATGGGC GTCGAGGTGG CGCGCGACAT GCGCGAAGGG
CTCGACGGCG CCGACATCGT GATGATGCTG CGGCTGCAGC GCGAGCGCAT GAACGGCTCG
TTCGTGCCCT CCTCGGCCGA GTACTTCAAC TATTTCGGGC TCGACCAGAA GAAGCTGTCC
TACGCCAAGC CGGACGCGCT GGTGATGCAC CCGGGCCCGA TGAACCGCGG TGTCGAGATC
GACTCGATCG TCGCCGACGG CGCGCAGTCG GTGATCCGCG AACAAGTGGA AATGGGCGTG
GCGGTGCGGA TGGCGGTGCT CGAAGCGCTC GCCCGCAACC TGCCGAACGC CTGA
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| Protein sequence | MTPAPKSTFV LGHRHLLGIE GLSAADISGL LDLSEEYVEL NRQVDKKRTS LRGRTQVNLF
FEASTRTQSS FEIAGKRLGA DVMNMSVSSS SMRKGETLMD TAVTLNAMHP DILVVRHHAS
GAVELLARKV DGSVINAGDG AHEHPTQALL DALTIRRNKG RLEGLVVAIC GDVMHSRVAR
SNILLLNTMG ARVRVVAPST LLPAGIERMG VEVARDMREG LDGADIVMML RLQRERMNGS
FVPSSAEYFN YFGLDQKKLS YAKPDALVMH PGPMNRGVEI DSIVADGAQS VIREQVEMGV
AVRMAVLEAL ARNLPNA
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