| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3523 |
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| Symbol | |
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| ID | 6411197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3769605 |
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| End bp | 3770087 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642713401 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_001992498 |
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| Protein GI | 192291893 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00889049 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCCC TGATCCTTCC TCTGATCGAA GCCGCCGTGC ATTGGCCGGT GCGCGGTGCC
CTGCTCGGCC TCGACCTCGG CACCAAGACG ATCGGCGTCG CCGCGTCCGA CCCGGACCGC
AAGCTCGCCA CCGGCGTCGA GACCATCGCC CGCAAGGCGT TCACCGCCGA TGCAGCCCGG
CTGCTGGCGC TGGCGGCCGA GCGCACGGCC TGCGGCTTCG TGCTCGGCCT GCCGCTCAAC
ATGGACGGCA GCGAAGGCCC GCGCGCGCAG TCAACCCGCG CCTTCGCCCG CAATCTCTCC
CGGCTCACCG AGCTACCGAT CGGATTGTGG GACGAACGGC TATCGACCGC GGCGGTCGAG
CGCGAGCTGA TCGCCAACGA CGTCAGCCGC GCGAAACGGG CCAAGGTCAT TGACGAGCAC
GCGGCGATCT TCATCCTGCA GGGCGCGCTC GACCGGCTCG CGGCGCTGCG CCGAGCCGAG
TGA
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| Protein sequence | MPALILPLIE AAVHWPVRGA LLGLDLGTKT IGVAASDPDR KLATGVETIA RKAFTADAAR
LLALAAERTA CGFVLGLPLN MDGSEGPRAQ STRAFARNLS RLTELPIGLW DERLSTAAVE
RELIANDVSR AKRAKVIDEH AAIFILQGAL DRLAALRRAE
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