Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3522 |
Symbol | |
ID | 6411196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3768370 |
End bp | 3769446 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642713400 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_001992497 |
Protein GI | 192291892 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0118514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCCGG ATCGCCGTCT CCTCGACCTG TTCGCTATCG AATGTCCGAT TCTGCTCGCC CCGATGGCGG GCGCGATGGA TGCTGAACTT GCTATTGCCG CGGCGCGCGG CGGGGCGCTG GCCTCGCTGC CGTGCGCGAT GCTGTCGCCG GACAAAGCGC GCGAGCAGGT CGGGATCTTC CGGCAGCAGA TTTCCGCGCC GATCAATCTG AATTTCTTCT GCCATCAGGC GGTGACGCCG GATGCCGCGC GCGAACAGAT CTGGCGCAAG CGGTTGACGC CTTACTTCAC CGAACTCGGG CTCGACCCGG CGATGCCGGC GCCCGCGGCG AGCCGGGCGC CGTTCGATGC GGCGATGTGC GCGCTGGTCG AGGAGTTGAA GCCCGAAGTC GTCAGCTTTC ATTTCGGTCT TCCTGAGGCC GCGCTGCTCG ATCGCGTCAA AGCGACCGGC GCCAAAGTGA TCGCAACCGC CACGATCGTG CGCGAGGCGA TCTGGCTGGA AGAGCACGGC GTCGACGCGG TGATCGTGCA GGGCGCGGAA GCCGGCGGCC ATCGCGGCAT GTTCATGACC GACGACATTG CGCAGCAGCC TGGATTATTC GCGCTGCTGC CGCAGGTGGT CGATGCGGTG CGGGTGCCGG TGATCGCGGC GGGCGGGATC GCGGACGGCC GCGGCATCGC AGCGGCGTTC GCGCTCGGCG CCGCCGGCGT GCAGATCGGT ACCGCGTATC TGCGCTGCCC GGAATCCCGG ACCAGCGCGC TGGTGCGGGT GCAGCTCGCG CAGGGCACCG ACGAAGCAAC CGTGATCACC AATGTGATGA CCGGGCGGCC GGCGCGCGGC GTCGCCAATC GCCTGATGCG CGAGGTCGGA CCGGTGTCGC CAGACGCGCC GGCGTTCCCG CACGCGGCCT CGGCCCTGGG ACCGCTGAAG GCGGCCGCCG AGCAGCTTGG CAAAACCGAC TTCACCAATC TGTGGGCGGG GCAGGCGGTG CGGCTCGGCC GCGACATGCC GGCGGCCGAA CTCACCCGGG CGCTGGCCGG CGCAGCCGTG GCGCGCCTCA GCCAGCTCGC GGGCTGA
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Protein sequence | MWPDRRLLDL FAIECPILLA PMAGAMDAEL AIAAARGGAL ASLPCAMLSP DKAREQVGIF RQQISAPINL NFFCHQAVTP DAAREQIWRK RLTPYFTELG LDPAMPAPAA SRAPFDAAMC ALVEELKPEV VSFHFGLPEA ALLDRVKATG AKVIATATIV REAIWLEEHG VDAVIVQGAE AGGHRGMFMT DDIAQQPGLF ALLPQVVDAV RVPVIAAGGI ADGRGIAAAF ALGAAGVQIG TAYLRCPESR TSALVRVQLA QGTDEATVIT NVMTGRPARG VANRLMREVG PVSPDAPAFP HAASALGPLK AAAEQLGKTD FTNLWAGQAV RLGRDMPAAE LTRALAGAAV ARLSQLAG
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