| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3481 |
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| Symbol | |
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| ID | 6411155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3727848 |
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| End bp | 3729104 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713360 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_001992457 |
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| Protein GI | 192291852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.114938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA GGCCGCCGAT TTCGCCGAGA AGCCCGCGTG CGGCGCTAGA GCCGGAACAG
CTTCCGCCGC CGCCGAAGCG GTCCGATCAC GCCCGCAATC CGCTGGTCAT CATCGGCAAC
GCGATCATCA CTTTCATTGT GGTTGTGATG ATCGGCGCCG GCGGCTTGTA CGTGTACGGC
AAGAACAAGC TCGAAGCGCC GGGACCGCTC GCGCAGGACA AGACTGTCAA TATTCCGCAG
CGTGCTGGCC TCGACGACAT CGCGCAGATC CTGAAGCGCG AAGGCGTCAT CGAAGACGGT
TGGCTGGTGT TCGCAGGCGG CGTGATGGCA CTGCGCGCCC GCACCGAGCT CAAGCCGGGC
GAGTATCTGT TTCAGAAGAA TGCCAGCCTG CGCGACGTGA TCGGAACCAT CGTCGAAGGC
AAGGTGGTGC AGCACGCGGT GACGATTCCC GAAGGACTGA CTTCGGAGCA GATCGTCGAG
CGCCTGTCCG ACAATCCTAT CTTCACCGGA AGCATCCGCG AAATTCCGCG CGAAGGAACA
TTGCTGCCGG AGACCTACAA GTTTCCGCGC GGGACGCCGC GCGAGCAGGT GATCCACCGC
TTGCAGCAGG CGCAGAAGCG GGTGCTCAGC GAGATCTGGG AGCGTCGCAG TCCCGACCTG
CCGATCAAGA CTCCGGAGCA ACTGGTGACG CTGGCTTCGC TGGTTGAGAA AGAGACCGGC
AAGCCGGACG AGCGCACACG CGTCGCCGCC GTATTCGTCA ATCGGCTGCA GAAGAAGATG
CGGCTGCAGT CCGATCCGAC GATCATCTAT GGCCTCGTCG GCGGCAAGGG CACGCTCGGC
CGCCCGATCA AGCGAAGCGA GATCACGCAG CCGTCCCCGT ACAACACCTA TGTGATCGAC
GGTTTGCCGC CCGGGCCGAT CGCCAATCCG GGGCGCGCGT CGCTGGAGGC TGCGGCCAAT
CCGGCGCGCA CCCGCGATCT GTACTTCGTC GCCGATGGCA GCGGTGGGCA CGCCTTCAGC
GACAATTACG AGGTGCACCA GAAGAACGTC GGCAAGCTGC GGGCACAGGA AAAGCAGCTC
CAGAACGACA CCGTCGAGCC GCCGGAGGAA ACGCCGCCGA CCACAGCCGC TCCGGCGGCA
GAGCCGGCGG GCGATCCTGC GGCAGCCGCG CCGGCCGGGG CGCCGAAGGC CGCCGGCAAG
AACGGTGCGC AGAAGCGTCG CGCTCGCAAT GCCACGCCGA ACGGTGCGAC CGAGTAA
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| Protein sequence | MSERPPISPR SPRAALEPEQ LPPPPKRSDH ARNPLVIIGN AIITFIVVVM IGAGGLYVYG
KNKLEAPGPL AQDKTVNIPQ RAGLDDIAQI LKREGVIEDG WLVFAGGVMA LRARTELKPG
EYLFQKNASL RDVIGTIVEG KVVQHAVTIP EGLTSEQIVE RLSDNPIFTG SIREIPREGT
LLPETYKFPR GTPREQVIHR LQQAQKRVLS EIWERRSPDL PIKTPEQLVT LASLVEKETG
KPDERTRVAA VFVNRLQKKM RLQSDPTIIY GLVGGKGTLG RPIKRSEITQ PSPYNTYVID
GLPPGPIANP GRASLEAAAN PARTRDLYFV ADGSGGHAFS DNYEVHQKNV GKLRAQEKQL
QNDTVEPPEE TPPTTAAPAA EPAGDPAAAA PAGAPKAAGK NGAQKRRARN ATPNGATE
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