| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3475 |
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| Symbol | pdxA |
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| ID | 6411149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3721904 |
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| End bp | 3722917 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713354 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001992451 |
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| Protein GI | 192291846 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAA TGGCAAAACC ACTGGCGCTG ACACTCGGCG AGCCTGCAGG GATCGGTCCC
GATATCGCCC TGGCAGCGTG GCTGAAGCGC GAGCAACACG GACTACCGCC ATTCTACCTT
CTTGGTGACG CCGGCTGTCT GTCCCGTTGT GCCAAACTGC TTGGCCTCGA CGTTCCACTG
GCAGAGGTCA AAGCCGAAGA CGCCGCGGCA GCGTTTGCGA CAACCCTTCC GGTTGTCTCC
ACAGGACAGA TCGCAACCGC GACGCCGGGC CAACCGGACG CCACCAGTGC GCCGGCCGCA
ATCGCGTCGA TCGAGCACGC TGTGGCCGAT GTCCGGAGCG GTCGCGCAGC CGCTGTCGTG
ACTAACCCAA TCGCCAAGAG CGTGCTGTAC CAGGCAGGCT TCCACCATCC CGGCCATACC
GAGTTTCTGG CTGAATTGGC CAAGCGAGAC GGCATCGTGC CGCAGCCGGT GATGATGCTG
TGGTGCCCTG CCCTCGCGGT CGTACCGGTG ACGATTCATG TCTCGCTGCG CGACGCGATC
ACCCAACTCA CCACTGATTT GATCGTGTCC ACCGCGCGGA TCGTCGTCAA AGACCTCCGC
GAGCGATTGG GCATTGCGCA ACCTCGTTTG GCGCTGGCAG GGCTCAACCC CCACGCCGGC
GAAGACGGCG CGCTTGGCCA AGAGGATCGG GCCGTGGTTG CACCCGCGGT GGCGATTCTG
CGCCGCGAAG GGGTCGACGC GCGTGGACCG CTGCCGGCAG ATACAATGTT CCATGCGGCA
GCACGAAAGA CCTATGACTG CGCGATCTGC ATGTATCACG ATCAAGCGCT GATCCCGATC
AAGACCATCG CCTTCGATGA GGGCGTCAAC GTCACGCTCG GTCTCCCCTT CATCCGGACC
TCGCCCGATC ACGGCACCGC GTTCGATATC GCCGGCAGTG GACAAGCCAA CCCGTCAAGC
CTGATCGCGG CCTTGAAGCT GGCCGCACAG ATGGCATCGG CCAAAACCGC ATGA
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| Protein sequence | MTGMAKPLAL TLGEPAGIGP DIALAAWLKR EQHGLPPFYL LGDAGCLSRC AKLLGLDVPL
AEVKAEDAAA AFATTLPVVS TGQIATATPG QPDATSAPAA IASIEHAVAD VRSGRAAAVV
TNPIAKSVLY QAGFHHPGHT EFLAELAKRD GIVPQPVMML WCPALAVVPV TIHVSLRDAI
TQLTTDLIVS TARIVVKDLR ERLGIAQPRL ALAGLNPHAG EDGALGQEDR AVVAPAVAIL
RREGVDARGP LPADTMFHAA ARKTYDCAIC MYHDQALIPI KTIAFDEGVN VTLGLPFIRT
SPDHGTAFDI AGSGQANPSS LIAALKLAAQ MASAKTA
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