Gene Rpal_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3474 
Symbol 
ID6411148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3720917 
End bp3721843 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID642713353 
ProductSurA domain 
Protein accessionYP_001992450 
Protein GI192291845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCA AGCTTTCCCT TCGCATCATT GGCTTGGCGC TGTGCTGTGC GGCGGCGGCG 
CTGAGTCTTG GAACGACGCA GGGCCAGGCT CAGTCGGTGG TGGTGATGGT CAATGGCGAA
CCGATCACCA ATTTCGACAT CGATCAGCGC TCGAAGCTGA ACCGGATGTC GCACAAGGCG
GACAGCCGGC AGCAGGTGCT CGAGGATCTG ATCGACGAGA AGGTCAAGAT CAAGGAAGCC
AAGAAGTACG GCGTCAATCC CAGCGATTCC GATATCGACT CCTCCTTCTC CACGATGGCG
TCGCGGATGC GGATGAGCAC CGCGCAGATG ACGAATATGC TGGCCGCTCA AGGCATTCGG
CCGGACACGT TGAAGTCGCG GATCAGGGCC GAGATGGTCT GGGCGAGCCT AGTGCGCGGC
CGATTCAAGG ACAGCTTGCA GGTCAGCGAG CGCGAAGTTC AGGCGCAGCT CAAGGGCGGC
GACGACACAA AGGCCGTCGA GAGCTTCGAA TATCAACTCC GGCCGGTGGT GATGATCGTG
TCGCGCGGCT CGGTTTCGGA ATCGCTCGAT GCCCGGCGCA AGGAAGCGGA GCAGTTGCGC
GGCCGCATCT CGAGCTGTGC CGAGGCCGAT CGCGTGTTCA AGGCAATGCC CAATGCGGCG
ATCCGCGGCA TCGTGATCAA GACCTCCGCT GACCTGCCGC CGGCGCTCCG CGAGATCCTC
GACAAGACGC CGGTGGGCCA CCTCACCCCG CCCGAAGTCA CCAAACAGGG CATCGAGATG
GTCGCGCTAT GCGAGCGGAA GCAGTCGACC GCCGATACGC CGCGCAAACG CGAAATTCGC
GAGAAGCTGT TCGGCGAGAA ATTCCAGGCA AAGTCGAAAG AGTATCTGCA GGAAGTGCGT
AAAGCCGCGA TGATCGAGTA TCGCTGA
 
Protein sequence
MTSKLSLRII GLALCCAAAA LSLGTTQGQA QSVVVMVNGE PITNFDIDQR SKLNRMSHKA 
DSRQQVLEDL IDEKVKIKEA KKYGVNPSDS DIDSSFSTMA SRMRMSTAQM TNMLAAQGIR
PDTLKSRIRA EMVWASLVRG RFKDSLQVSE REVQAQLKGG DDTKAVESFE YQLRPVVMIV
SRGSVSESLD ARRKEAEQLR GRISSCAEAD RVFKAMPNAA IRGIVIKTSA DLPPALREIL
DKTPVGHLTP PEVTKQGIEM VALCERKQST ADTPRKREIR EKLFGEKFQA KSKEYLQEVR
KAAMIEYR