| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3453 |
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| Symbol | aspS |
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| ID | 6411127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3695172 |
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| End bp | 3696947 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713332 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001992429 |
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| Protein GI | 192291824 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0866598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCGTT ACCGAACCCA TACCTGCGGC GCGCTCCGCG ACAGCCATAT CGACCAGACC
GTTCGCCTGT CCGGCTGGTG CCACCGCATT CGCGACCATG GCGGCGTGCT GTTCATCGAT
CTGCGCGACC ATTACGGCCT CACCCAATGC GTTGCCGATC CGGATTCCCC GGCGTTCAAG
GACGCCGAAA AGCTCCGCGC CGAATGGGTG GTGCGGATCG ACGGCAAGGT CCGCCGCCGC
CCTGAGGGCA CCGACAATCC CGACCTGCCG ACCGGCGCGG TCGAGGTGTT CGTGACCGAG
ATCGAAGTGC TCGGCCCGGC CGGCGAACTG CCGCTGCCGG TGTTCGGCGA GCAGGAATAT
CCGGAAGACG TGCGCCTGCG TTATCGCTTC CTCGACCTGC GCCGGGAGAA GCTGCACCAG
AACATCATGA CCCGTGGCGC GATCGTCGAC TCGATGCGCC GGCGGATGAA GGAACAGGGC
TTCTTCGAGT TCCAGACCCC GATCCTGACG GCGTCGTCGC CGGAAGGCGC GCGCGACTTC
CTGGTGCCGA GCCGCATCCA TCCGGGCAAG TTCTACGCGC TGCCGCAGGC GCCGCAGCAG
TACAAGCAGC TGCTGATGAT GTCGGGCTTC GACCGTTACT TCCAGATCGC GCCGTGCTTC
CGCGACGAAG ATCCGCGTGC CGACCGCCTG CCGGGCGAAT TCTATCAGCT CGACGTCGAG
ATGAGCTTCG TCACCCAGGA CGACATCTTC GCCGCGATGG AGCCGGTGAT CACCGGCGTG
TTCGAGGAAT TCGCCAAGGG CAAGCGCGTC ACCAAGGGCT GGCCGCGCAT CGCGTTCGCC
GACTCGATGC GGAAGTACGG CACCGACAAG CCGGACCTGC GCAACCCGAT CGAGATGCAG
GACGTCTCCG AGCACTTCCG CGGCTCCGGC TTCAAGGTGT TCGCGCGGAT GCTCGAAGAG
CAGCGCAACC AGGTCTGGGC GATCCCAGGT CCGGGCGGCG GCTCCCGCGC GTTCTGCGAT
CGCATGAATT CGTGGGCGCA GGGCGAAGGC CAGCCCGGCC TCGGCTACAT CATGTGGCGC
GAAGGCGGCG AGGGCGCCGG TCCTCTGGCG AACAACATCG GGCCGGAGCG CACCGAAGCG
ATCCGCACCG CGCTCGGCCT GAAGGCCGGC GATGCCGCGT TCTTCGTGGC TGGTGATCCG
TCGAAGTTCG TCAAATTCGC CGGGCTCGCG CGCACCAAGG TCGGCGAGGA ATTGAACCTG
ATCGACAAGG ATCAGTTCGC GCTCGCCTGG GTCGTCGACT TCCCGATGTA CGAGTACAAC
GAGGACGACA AGAAGGTCGA CTTCTCGCAC AACCCGTTCT CGATGCCGCA GGGCGGCATG
GAGGCGCTGA CGTCGCAGGA CCCGCTGACC ATCAAGGCGT TCCAGTACGA CATCACCTGC
AACGGCTACG AGATCGCCTC GGGCGGCATC CGCAACCATC GCCCCGAGGC GATGGTGAAG
GCGTTCGAGA TCGCCGGTTA CGGGGAGCAG GAAGTGGTCG ACCGGTTCGG CGGCATGTAC
CGCGCGTTCC AGTACGGCGC TCCGCCGCAT GGCGGTATGG CGGCCGGTGT CGACCGCATC
GTGATGCTGC TGTGCGGCAC CACCAATCTG CGCGAAATCT CGCTGTTCCC GATGAACCAG
CGTGCGGAAG ACCTGCTGAT GGGCGCGCCC TCGGAGGTCT CGCCCAAGCA ACTTCGCGAA
CTGCACATCC GGCTCAATCT GCCCGACACT AAGTAA
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| Protein sequence | MHRYRTHTCG ALRDSHIDQT VRLSGWCHRI RDHGGVLFID LRDHYGLTQC VADPDSPAFK
DAEKLRAEWV VRIDGKVRRR PEGTDNPDLP TGAVEVFVTE IEVLGPAGEL PLPVFGEQEY
PEDVRLRYRF LDLRREKLHQ NIMTRGAIVD SMRRRMKEQG FFEFQTPILT ASSPEGARDF
LVPSRIHPGK FYALPQAPQQ YKQLLMMSGF DRYFQIAPCF RDEDPRADRL PGEFYQLDVE
MSFVTQDDIF AAMEPVITGV FEEFAKGKRV TKGWPRIAFA DSMRKYGTDK PDLRNPIEMQ
DVSEHFRGSG FKVFARMLEE QRNQVWAIPG PGGGSRAFCD RMNSWAQGEG QPGLGYIMWR
EGGEGAGPLA NNIGPERTEA IRTALGLKAG DAAFFVAGDP SKFVKFAGLA RTKVGEELNL
IDKDQFALAW VVDFPMYEYN EDDKKVDFSH NPFSMPQGGM EALTSQDPLT IKAFQYDITC
NGYEIASGGI RNHRPEAMVK AFEIAGYGEQ EVVDRFGGMY RAFQYGAPPH GGMAAGVDRI
VMLLCGTTNL REISLFPMNQ RAEDLLMGAP SEVSPKQLRE LHIRLNLPDT K
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