| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3413 |
|---|
| Symbol | |
|---|
| ID | 6411087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3654021 |
|---|
| End bp | 3655724 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642713293 |
|---|
| Product | potassium-transporting ATPase subunit A |
|---|
| Protein accession | YP_001992390 |
|---|
| Protein GI | 192291785 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2060] K+-transporting ATPase, A chain |
|---|
| TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCA TTGGTTGGTG TCAAATTGCG CTGTTCGGCG CCGTCGTGGT CGCGCTGGTC
AAGCCGCTCG GCTGGTACAT GACGCGCGTC TTTGCCGGCG AGTGGACGCC GCTGACGCCC
GTACTGCGCC CGGTCGAGAC AGTGCTGTAT CGCGCAGCTG GTGTCGATCC AAAGCAGGAA
CAGCATTGGC TGACCTTCAC CCTGGCGATG CTGCTGTTTC ACATCGGTGG TTTCGCGATC
ATCTACGCGG TATTGCGTCT GCAGGCACTG CTGCCGTTCA ATCCCGCGGA GCAGGGTGCG
GTGGCGCCAG ACCTGGCGTT CAACACGGCG ATCAGCTTCC TGACCAACAC GAATTGGCAG
AACTACGGCG GCGAGAGTAC GCTGTCCTAT CTGTCGCAGA TGCTGGCGCT GACACACCAG
AATTTCTTGT CTGCCGCGAC CGGTATCGTC TTGGCGATGG CGTTGATCCG CGGCTTCTCG
CGTGCATCGG TGCGCACCAT TGGAAACTTC TGGGTCGATA TCACCCGCTG CACGCTGTAC
GTGCTGCTGC CGATCTGCAT TCCCTATGCG CTGTTCCTGG TGTGGCAGGG CATGCCGCAG
ACCTTAGGCA GCTACGTCGA CGCGACTACG CTCGAAGGAG CGAAGCAGAC AATCGCGGTT
GGTCCGGTCG CCTCGCAGGT TGCGATCAAG ATGCTGGGCA CCAATGGCGG CGGTTTCTTC
AATGCCAACG CCGCGCATCC GTTCGAGAAC CCGACAGCGC TGTCCAATTT CGTGCAGATG
TTGTCGATCT TTGTGCTCGG CGCCGCGCTC ACCAACGTGT TCGGCCGGAT GATCGGCAAT
CAGCGGCAGG GCTGGGCCAT CCTCGGCGTC ATGGGTGTGC TGTTCGTGGT CGGGATTGCG
GTCGCTTACT GGGCCGAGGC TTCCGGAACG GTCACGCTTG ATGCGCTCGG GATCACCGGC
GGCAACATGG AAGGCAAGGA GGTCCGGTTC GGCATCGTGG CGTCGGCGCT GTTCGCAGTG
GTGACCACGG CCGCCTCCTG CGGCGCGGTG AACGCGATGC ACGACTCCTT CACCGCGCTC
GGTGGCATGA TCCCGCTGAT CAACATGCAG CTCGGCGAGA TCATCGTCGG CGGCGTCGGC
GCCGGCCTTT ACGGCATGCT GCTGTTCGTC GTGCTGGCGA TTTTCGTCGC CGGGCTGATG
GTCGGGCGCA CCCCGGAATA CGTCGGCAAG AAGATCGAAG CCCGCGAAGT GAAAATGGCG
ATGCTGGCGA TCCTGGTGCT GCCGCTGATG TATCTCGGCT GGACCGCTAT CGCCGTGGTG
CTGCCGTCGG CGGTCGCCTC GATGGGCAAT GCCGGACCGC ATGGCTTCAG CGAGGTGCTG
TACGCCTTCA CGTCGGCGAC CGCGAACAAC GGGTCGGCAT TCGGCGGGCT CACCGGCAAC
ACCTTCTTCT ACAACCTCAC CTTGGCGACA GCGATGTTCG TCGGCCGGTT CATGATGATC
GTACCGACGA TGGCGATCGC CGGATCGCTT GCCGGCAAGA AGCTGGTGCC GCCGTCGGCT
GGCACGTTGC CGACCACCGG CGGGCTGTTC GTCGGCCTGG TCGTCGGCGT GATCCTGATC
ATCGGTGGGT TGACCTTCTT CCCGGCGCTC GCGCTCGGCC CGATCGTCGA GCAGGTCTCG
ATGTCGGCCA AGACACTGTT CTGA
|
|---|
| Protein sequence | MTFIGWCQIA LFGAVVVALV KPLGWYMTRV FAGEWTPLTP VLRPVETVLY RAAGVDPKQE
QHWLTFTLAM LLFHIGGFAI IYAVLRLQAL LPFNPAEQGA VAPDLAFNTA ISFLTNTNWQ
NYGGESTLSY LSQMLALTHQ NFLSAATGIV LAMALIRGFS RASVRTIGNF WVDITRCTLY
VLLPICIPYA LFLVWQGMPQ TLGSYVDATT LEGAKQTIAV GPVASQVAIK MLGTNGGGFF
NANAAHPFEN PTALSNFVQM LSIFVLGAAL TNVFGRMIGN QRQGWAILGV MGVLFVVGIA
VAYWAEASGT VTLDALGITG GNMEGKEVRF GIVASALFAV VTTAASCGAV NAMHDSFTAL
GGMIPLINMQ LGEIIVGGVG AGLYGMLLFV VLAIFVAGLM VGRTPEYVGK KIEAREVKMA
MLAILVLPLM YLGWTAIAVV LPSAVASMGN AGPHGFSEVL YAFTSATANN GSAFGGLTGN
TFFYNLTLAT AMFVGRFMMI VPTMAIAGSL AGKKLVPPSA GTLPTTGGLF VGLVVGVILI
IGGLTFFPAL ALGPIVEQVS MSAKTLF
|
|---|
| |