Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3410 |
Symbol | |
ID | 6411084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3648495 |
End bp | 3651218 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642713290 |
Product | osmosensitive K+ channel signal transduction histidine kinase |
Protein accession | YP_001992387 |
Protein GI | 192291782 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATC CGCGCGTTGA GCCGCCTTCG CGACCCTCTC CGGACGCCTT GCTTGAACAG GCGAGGCGGC AGGAGCCCGG CACGGGCCGG CTCAAGGTCT TCCTTGGGGC CGCGCCTGGC GTCGGGAAGA CTTACGCCAT GCTGCAGAGC GCGCACGCCC GAGCCAAGGC CGGGGTCGAT GTGGTGATCG GCTATGCCGA GACCCATGGC CGTGCCGAGA CCGAGGCCTT GCTTGCCGGC CTGGAGACCG TGCCGCGCCG GCGCATTCCG TACAAAGGGC AGGTCCTCGA AGAGATGGAC CTCGACGCGG TGCTCGCCCG GCGGCCGCAG CTCGCCATCG TCGATGAGCT TGCGCACAGC AACGCCCCGG GCAGCCGCCA TCCTAAGCGC TATCTCGACG TATTGGAGCT GTTGGCCAAC GGCATCGACG TCTACACCGC GGTCAACATT CAGCACATCG AAAGCCTGAA CGACGTCGTC GCGCAGATCA CCACGGTTCG GGTGCGGGAG ACCGTCCCGG ACTCGGCGTT CGAGCGGGCC GATGCGATCG AGTTGGTCGA CCTGACGCCG GACGACCTGA TCCAGCGTCT GAAGGAAGGC AAGGTCTATG TGCCGAAGCA GGCCGAGCGC GCGCTGGAGC ACTACTTCTC ACCGGGCAAC CTGACCGCAC TGCGCGAACT GGCACTGCGG CGGACCGCCG AGCGGGTCGA CGAGCAGCTG CTGTCGCACA TGCAGGCCAA TGCGATCCCC GGGCCATGGG CCGCGGGCGA GCGCGTGCTG GTGTGCGTCA GCCACGATCA GCGCTCGCAG GGGCTGGTCC GCTACACCAA ACGGCTCGCG GACCGGCTGC GTGCGCCGTG GACGGCGATC AACATCGAGA CGCGTCGCAG CCTGTCGCTG ACCGAGCAGC AGCGCGATCG GCTCGCCGAT ACGCTGCGTC TGGCCGAGGC GCTGGGCGGC GAAGCGCTGG CGATCCCCGG CGGCGATCGC AGCCTGGCGC ACGACATCCT GGCGTTCGCG CGCGCCAACA ACATTACCCA GATCGTGGTC GGCAAGGCGC CGCGATCGTT CTGGTACGAA GCTCTGCGCG GCTCGACGGT CCACGAGCTG GTGCGCGGCT CCGGCAACAT CTCGATCCAC GTCATGACCG GTACCGCGGT CTCGATCGAG GAAAGCCAGA CCGGTTCGCT GCGCCCGGCC GAGGGAACGG AGCCGTTCAA CCCGTGGCCG TATCCGATGG CGCTGGTGCT GGTCGGGATC GGGCTCGGCG TGGCCAAGCT GATCGAACCG TTCTTCAGCA TCGAGAACGT CGATCTGGTG TTTCTCACCG CGGTGGTCGG CGTCGCGGTC CGCTACGGGC TGGGGCCCTC GCTGCTCGCC AGCGTCGTCG CGTCGCTGTG CTACAATTTT TTCTTTCTTC CGCCGGTCTA CACTTTCACC ATCACCGATC CGACCAACAT CGTCGCGTTC TTCTTCTTCA TGTTGATCGC GATCCTGGTC TCGAACCTCG CCGGGCGTGT TCGCGCCCAG GCGACCGCCG CGGCGCAGCG GGTGCGGACG ACGGAGTCGC TGTACGCCTT CAGCCGGAAG CTCGCCGGTA CCGCCGCGCT CGACGACGTG CTGTGGGCGA CCGCTTATCA GATCGCACTG ATGCTGAAGG TCCGGGTGGT GTTGCTGCTC CCCGAACAGG GCCGCATCGC CGTCAAGGCC GGCTATCCGC CGGAAGATCA GCTGGATCCG GCCGATCTCG CGGCGGCGAA TTGGGCTTGG GAGAACGATC GAGTGGCAGG GCGAGGCTCG GACACCTTAC CCGGTGCCAA ACGTTTGTTT CTGCCGATGC GGACCGGACG CGGACCGATC GGCGTGATCG GGATCGATGA TGATCGCGCC GGTGCCTTGC TGACGCCGGA CCAGCGCCGC CTGCTCGACG CACTGACCGA TCAGGGGGCG CTGGCGATCG AGCGGGTGCA TCTGGTCGAG GACATGGATC GGGTCAAGCG CGATGCCGAG TCCGACCGGT TGCGGCAAGC GTTGCTCACC TCGATTTCGC ACGATCTGAA GACTCCGCTG GCCGCGGTCC TCGGCGCTGC GACGACGATG CGGGATCTGG CGCCGCATCT GAGCGACGCG CAACGAACCG AACTGATCGG CACTATCGTC GAGGAGTCCG AGCGCCTCAA CCGCTTCATC GCCAATCTGC TGGACATGAC CAAGCTCGAA TCCGGTGCCG TCGTGCCGAA CAGCGCAGCG CACGATCTCG GCGAACTGGT CGGCGCCACG CTGCGGCGCG CGACATCGAT CCTGGCGCAG CATACGGTCA AGCTGGATCT CGGGCATGAT CTGCCGCTGA TCGAGGTCGA TCCGGTGCTG TTCGAACAGG CGCTGTTCAA CCTGCTCGAC AACGCAGCGA AATACGCGCC GGCCGGCAGT GCCATCCAGC TTCGCGCCGC GCAGAGCGGC GGTCAGGTTG AGCTTCAAGT GCGCGACGAA GGCGAGGGCA TTCCGCCTGC CGAACTGGAA ACCGTGTTCG ATAAATTTTA TCGCGTGCGG AAAGGCGATC ATATAAGGCC CGGTACCGGC CTCGGCCTGG CGATCGCACG AGGTTTCATC GAGGCCATGG GCGGGCGATT GTCGGCCGGC AATCGATCCG ATCGTAGCGG TGCCGCGATG ACTATCCGTC TCCCCGTCGC ATCGCGTGGC GATGCCCTGA TCAGTGCAGC GTGA
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Protein sequence | MPDPRVEPPS RPSPDALLEQ ARRQEPGTGR LKVFLGAAPG VGKTYAMLQS AHARAKAGVD VVIGYAETHG RAETEALLAG LETVPRRRIP YKGQVLEEMD LDAVLARRPQ LAIVDELAHS NAPGSRHPKR YLDVLELLAN GIDVYTAVNI QHIESLNDVV AQITTVRVRE TVPDSAFERA DAIELVDLTP DDLIQRLKEG KVYVPKQAER ALEHYFSPGN LTALRELALR RTAERVDEQL LSHMQANAIP GPWAAGERVL VCVSHDQRSQ GLVRYTKRLA DRLRAPWTAI NIETRRSLSL TEQQRDRLAD TLRLAEALGG EALAIPGGDR SLAHDILAFA RANNITQIVV GKAPRSFWYE ALRGSTVHEL VRGSGNISIH VMTGTAVSIE ESQTGSLRPA EGTEPFNPWP YPMALVLVGI GLGVAKLIEP FFSIENVDLV FLTAVVGVAV RYGLGPSLLA SVVASLCYNF FFLPPVYTFT ITDPTNIVAF FFFMLIAILV SNLAGRVRAQ ATAAAQRVRT TESLYAFSRK LAGTAALDDV LWATAYQIAL MLKVRVVLLL PEQGRIAVKA GYPPEDQLDP ADLAAANWAW ENDRVAGRGS DTLPGAKRLF LPMRTGRGPI GVIGIDDDRA GALLTPDQRR LLDALTDQGA LAIERVHLVE DMDRVKRDAE SDRLRQALLT SISHDLKTPL AAVLGAATTM RDLAPHLSDA QRTELIGTIV EESERLNRFI ANLLDMTKLE SGAVVPNSAA HDLGELVGAT LRRATSILAQ HTVKLDLGHD LPLIEVDPVL FEQALFNLLD NAAKYAPAGS AIQLRAAQSG GQVELQVRDE GEGIPPAELE TVFDKFYRVR KGDHIRPGTG LGLAIARGFI EAMGGRLSAG NRSDRSGAAM TIRLPVASRG DALISAA
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