Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3308 |
Symbol | clpX |
ID | 6410980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3563752 |
End bp | 3565026 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642713186 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001992285 |
Protein GI | 192291680 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAGG TCGGTACGAG CGACTCCAAG AACACCCTGT ACTGCTCGTT CTGCGGAAAG AGCCAGCACG AGGTCCGCAA GCTGATCGCC GGCCCCACGG TATTCATCTG CGATGAATGT GTGGAACTGT GCATGGACAT CATTCGCGAG GAGAACAAGT CCTCGCTGGT GAAGTCGCGT GACGGAATCC CGACGCCGAA GGAGATCTGC AAGGTTCTCG ATGACTACGT CATCGGTCAG AACCATGCGA AGAAGGTTCT CTCGGTCGCG GTCCACAATC ACTACAAGCG GCTGAACCAC CAGACCAAGC ACAACGACGT CGAACTGGCG AAGTCGAACA TCCTGCTGAT CGGTCCGACC GGCTCGGGCA AGACGCTGCT GGCGCAGACG CTGGCGCGGA TCCTCGACGT GCCGTTCACG ATGGCTGATG CGACCACGCT GACCGAAGCC GGCTATGTCG GCGAGGACGT CGAGAACATC ATCCTGAAGC TGCTGCAGGC GGCCGACTAC AATGTCGAGC GGGCGCAGCG CGGTATCGTG TACATCGACG AAATCGACAA GATCAGTCGC AAGTCGGACA ATCCCTCGAT CACTCGCGAT GTCTCGGGCG AGGGCGTCCA GCAGGCGCTG CTGAAGATCA TGGAAGGTAC GGTGGCGTCG GTCCCGCCGC AGGGCGGCCG CAAGCATCCG CAGCAGGAAT TCCTGCAGGT GGACACCACC AACATCCTGT TCATCTGCGG CGGCGCGTTC GCCGGGCTCG AGAAGATCAT CTCGTCGCGC GGCCGGACCA CCTCGATCGG CTTTGCGGCG CAGGTGCTCG CGCCGGAAGA TCGCCGCACC GGTGAGATCT TCCGCCACGT CGAGCCCGAG GATCTGCTCA AGTACGGCCT GATCCCGGAA TTCGTCGGCC GTCTGCCGGT GGTTGCCACC CTGGAAGACC TCGACGAGAA CTCGCTGAAG AAGATCCTGA CCGATCCGAA GAACGCGCTG GTCAAGCAGT ACCAGCGGCT GTTCGAAATG GAGAACGTCG AGCTCACCTT CGCCGACGAA GCGCTTGGCG CGGTCGCCCG TAAGGCGATC GAACGCAAGA CCGGCGCCCG TGGCCTGCGG TCGATCCTGG AGAGCATCCT GCTTGAGACC ATGTTCGACC TCCCGGGCCT GGAAGGCGTC GAGGAAGTGG TGATCTCGCG CGAAGTGGTC GATGGCACCG CGCGGCCGCT TTACATCTAT GCCGACCGCA CCGACCGTGC GGCCGAGACC AGCGCCAGCG CCTGA
|
Protein sequence | MSKVGTSDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ENKSSLVKSR DGIPTPKEIC KVLDDYVIGQ NHAKKVLSVA VHNHYKRLNH QTKHNDVELA KSNILLIGPT GSGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQAADY NVERAQRGIV YIDEIDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT NILFICGGAF AGLEKIISSR GRTTSIGFAA QVLAPEDRRT GEIFRHVEPE DLLKYGLIPE FVGRLPVVAT LEDLDENSLK KILTDPKNAL VKQYQRLFEM ENVELTFADE ALGAVARKAI ERKTGARGLR SILESILLET MFDLPGLEGV EEVVISREVV DGTARPLYIY ADRTDRAAET SASA
|
| |