Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3278 |
Symbol | |
ID | 6410948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3528832 |
End bp | 3529362 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642713154 |
Product | nuclear export factor GLE1 |
Protein accession | YP_001992255 |
Protein GI | 192291650 |
COG category | [S] Function unknown |
COG ID | [COG4549] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATACGGC TGCGATCCGT ATCGGCAGCG GCGGCCCTTG CGGCCGCCGC GCTCGGCGCC GCGCCGGCGC TGGCCCACGT CACGTTGCAG CCGAACGAGG CGGTGGCCGG CAATTACTTC CAAGCGGCAC TCAGCGTGCC GCACGGCTGC GACGGCACCG CGACAGTCGC GGTGCGGGTC AAGATTCCGG ACGGCGTGCT GTCGGTGAAG CCGCAGATGA AGCCGGGCTG GTCGGTCGAG ATCAAGACCC GCAAGATCGA AGGCGAACAG CCGAAGCTGC ACGGCAAGAC CGTCACCGAA ACGGTCGACG AGGTGACCTG GCGCGGCGGT CCGCTCCCGG ACAACCTCTA CGACACCTTC GGCCTGGTAA TGAAACTGCC TGATGCCGCC GGCAAGACGC TGTACTTCCC GGTGGTGCAG GAATGCGAGA AGGGAGTTTC GCGCTGGATC GAAATTCCTG CTGCGGGACA GAAGTCCGAC GCCCTGCATG AGCCGGCCCC GGCGCTGCGG CTGAAGCCGA AGGCGCCGTG A
|
Protein sequence | MIRLRSVSAA AALAAAALGA APALAHVTLQ PNEAVAGNYF QAALSVPHGC DGTATVAVRV KIPDGVLSVK PQMKPGWSVE IKTRKIEGEQ PKLHGKTVTE TVDEVTWRGG PLPDNLYDTF GLVMKLPDAA GKTLYFPVVQ ECEKGVSRWI EIPAAGQKSD ALHEPAPALR LKPKAP
|
| |