Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3254 |
Symbol | |
ID | 6410924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3500384 |
End bp | 3501028 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642713130 |
Product | CMP/dCMP deaminase zinc-binding |
Protein accession | YP_001992231 |
Protein GI | 192291626 |
COG category | [F] Nucleotide transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0590] Cytosine/adenosine deaminases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAA CCAAAATCGA GTCTGCCTCG ACGCTTGATA CGCTGTTCGC GTCGGTGACC GTCGTTCACC GCAGGAATTT TCTCGCAACC GGCGCTGCCG CCTTCGGTGC GGCTGTATTG CCTGCCGGGG CGACGGTTGC GGATGCTAAG CCTGCACTGG CCACGGCGCC GACGGAGCAA GATCGTCGCT ACATGACGCA GGCCATCGAA TTGATGCGCA AGGCAGGTGT GGTCGAAAAG ACAGGTGGCG CGTTCGGGGC CGTGATCGTG CGTGATGGCG AAGTACTCTC GGCGACCGGC AACAGTGTGC TGCGCGACAA CGATCCGTCC GCCCACGCCG AAGTCAATGC GATCCGCGCC GCGTGCAAGA AGGTTGGCGC GCCGAACCTG CGCGGCGCAA CGATGTACAC GAGCTGCGAA TGCTGTCCGA TGTGCTACGC CACCGCTTAC TGGGCGCGGC TCGATCGGAT CTTCTACGCG GCGTCGTGGA CCGACTACGC GGACTTGTTC GACGATTCCA ATATCGGCGC TGACATGAAG AAGCCCTACG CAAAACGCCA GGTTAAGATC GCGCAGATGA TGCGCGGCGA TGCGCAGAAG GTCTGGAATG AGTTCCGCGC GCTGCCGGAT CGGGCTCGCT ACTGA
|
Protein sequence | MKKTKIESAS TLDTLFASVT VVHRRNFLAT GAAAFGAAVL PAGATVADAK PALATAPTEQ DRRYMTQAIE LMRKAGVVEK TGGAFGAVIV RDGEVLSATG NSVLRDNDPS AHAEVNAIRA ACKKVGAPNL RGATMYTSCE CCPMCYATAY WARLDRIFYA ASWTDYADLF DDSNIGADMK KPYAKRQVKI AQMMRGDAQK VWNEFRALPD RARY
|
| |