Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3250 |
Symbol | |
ID | 6410920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3493210 |
End bp | 3495477 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642713126 |
Product | ComEC/Rec2-related protein |
Protein accession | YP_001992227 |
Protein GI | 192291622 |
COG category | [R] General function prediction only |
COG ID | [COG0658] Predicted membrane metal-binding protein |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCGGC GCGATCGGAC CAGAGCACAG ACATGGCCGA CCAGGGCGCC GGCGGGCGCG GGTGCGTTGC TGCCCTTCGG CCTGTCGTGG GGACCGGCGT TTCTTGATCT GTTACGCGAC TGTGTGCGGG CCGAAGCGGG GCCGGGCCGG TTGCTGCCGT GGACGCCGGT GGCATTTGGC GCCGGTATTG CCTTGTACTT CGCCGCCGAT CACGAGCCGG TTGCCTGGGT GGCAGCTGCG ACCGCTGCTG GCTTCGTCAT CGCGGCTGTC CTGCTTCGGC GCAGCCGAGC ATTCGCGCCG GTCTTGTTGC TGACGGCTCT GCTGGCTGGC TTTGCGACAG CGTCGCTGAA AGCTGCGCGG ATCGCGCATC CGGTGCTGGC CGCGCCGGTG TTCGCAGCGG AGCTGCGGGG CTTTGTCGAA ATCCGGGAAG AGCGCGAGCG CACCGACCGC TTCGTCCTAC GAGTGACGCA GATGCAGGCG GCACGGGCGC CCACGCTGGA GCGGGTGCGT CTGTCGGTGA AGAAGGGCAC GGCGCCGACG GTCGGTAGCT TCGTGACGCT GAAGGCGCGG CTGCAGCCGC CACTCCAGCC GTTGCGGCCA GGCAGCTACG ACTTCGCGCG CGATCTGTAT TTCCAGGGTA TCGCCGCGTC CGGTTTCGTT CTCGGTGCAA TGACCACCGC CGAGCCGCCG CAGGACGGCG GCTGGCGCTT GCGCTACGCC GCGGTGATGC AGGGCCTGCG CGATGCGATC GACGCCCGGA TCCGCGCGTC GCTCGGCGGC GATCCGCGTG CGATCGCCAC AGCGCTGCTT ACAGGCAAGC GAGACGCGAT CTCGACCCCG GTGAACGATG CAATGTTCAT TTCCGGTCTC GGTCACGTGC TGTCGATCTC CGGCTATCAC ATGGCGGTGG TGGCCGGCGT GGTGTTCTTC GCGTTGCGCG CACTGCTGGC GCTGATCCCG CGGCTGACGG TGACGTTTCC AATCAAGAAG GTCGCGGCGG CGGGCGCGCT GCTCGCCGCG GCGTTCTATC TGGCGCTGTC GGGCGCAGAA GTCGCGACAC AGCGCAGCTT TCTGATGACC GCGGTGGTGC TGATCGCCGT GATGGTCGAC CGCCGTGCCA TCACGTTTCG CACATTGGCG CTTGCGGCGC TGGTGGTGCT GCTGATCGCG CCGGAAGCGT TGGTGCATCC GAGCTTCCAG ATGTCGTTTG CGGCCACACT CGGTTTGGTG GCGCTGGTGC AGATCGGCAT GCCGGCGCTG TTCGGTGCGG ACGACAGCTC AGTGGCGGCG CGGGTAGCGA CGTGGGGCGG GCGGGAAATT GCGCTGCTGG CGCTCGCCTC GCTGGTCGCC GGTTTCGCGA CGATGCCGTA TGCCGCCTAT CATTTCCACC GCATCACGCC TTATGGCGTG CTCAGCAACC TGGCGGCGAT GCCGGTGGTG TCGGCGATCG TGATGCCGGC GGGGCTGCTC GGGCTCGCGG CGATGCCGTT CGGGCTCGAT GCGCCGTTCT GGCGGATCAT GGAGCTCGGA ATCGACTGGA TGATCCTGGT CGCGCAATGG GTGGCAGCGC TCCCGGGCGC GGTCGGCCGG GTTACCGCGT TCGGCACCGG ACCCTTGCTC GTCGCCTCGC TCGGTATCGT GATGCTCGGC CTGTTGCGCT CGCCGCTGCG CTGGGGCGGG GCGCTCGGCG TTGGCGTCGC CGTCGCCTGG GCAGCGCTGA CGCCGCAGCC GGAGGTGCTG ATCGCCGGCG ATGGCAGGCA GGTCGCGGTG CGCGGCGCCG ATGGCCGGCT GCACCTGATG CAGAGCGGCG CCGATGCGTT CCGGCTAAAG GAATGGCTGG CGGCCGATGC CGACTCCCGA GCACCGGATG CGGCATCGTT GCGCGCTGGC GTCTCCTGCG ATCCGGACGG ATGCGTGACG CCATTGGCGG ACGGACGGCT GGTGGCGCTG TCGCTGCGGC CCGATGGGCT TGCGGACGAC TGCGCCCGCG CCGTGCTGAT CATCACCGCC GGCCAGCCGC CGCCGGATTG CGCCGCACGG GTGATCGGTC GGGACGAATT GCAGGCCAAT GGCGCGCTGG CGCTGCGGCG GAGCGGAAGT GACCCAGGGC TGTTTGTGGC GGACGCGACC CGACCTCGCG GCCCAAGCCG GCCATGGGCT CCAGCGGCCG CGGAGGCGAT GGACGCTACT GTCTCGACCG GACCTTCCGT CCGTCGGCCC CCGGTCGACG CCACGCCAGC CCCGCAGGAT CAAGCGGGCG AGGAGTGA
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Protein sequence | MERRDRTRAQ TWPTRAPAGA GALLPFGLSW GPAFLDLLRD CVRAEAGPGR LLPWTPVAFG AGIALYFAAD HEPVAWVAAA TAAGFVIAAV LLRRSRAFAP VLLLTALLAG FATASLKAAR IAHPVLAAPV FAAELRGFVE IREERERTDR FVLRVTQMQA ARAPTLERVR LSVKKGTAPT VGSFVTLKAR LQPPLQPLRP GSYDFARDLY FQGIAASGFV LGAMTTAEPP QDGGWRLRYA AVMQGLRDAI DARIRASLGG DPRAIATALL TGKRDAISTP VNDAMFISGL GHVLSISGYH MAVVAGVVFF ALRALLALIP RLTVTFPIKK VAAAGALLAA AFYLALSGAE VATQRSFLMT AVVLIAVMVD RRAITFRTLA LAALVVLLIA PEALVHPSFQ MSFAATLGLV ALVQIGMPAL FGADDSSVAA RVATWGGREI ALLALASLVA GFATMPYAAY HFHRITPYGV LSNLAAMPVV SAIVMPAGLL GLAAMPFGLD APFWRIMELG IDWMILVAQW VAALPGAVGR VTAFGTGPLL VASLGIVMLG LLRSPLRWGG ALGVGVAVAW AALTPQPEVL IAGDGRQVAV RGADGRLHLM QSGADAFRLK EWLAADADSR APDAASLRAG VSCDPDGCVT PLADGRLVAL SLRPDGLADD CARAVLIITA GQPPPDCAAR VIGRDELQAN GALALRRSGS DPGLFVADAT RPRGPSRPWA PAAAEAMDAT VSTGPSVRRP PVDATPAPQD QAGEE
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