| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3220 |
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| Symbol | mdoD |
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| ID | 6410890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3466007 |
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| End bp | 3467518 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713096 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001992197 |
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| Protein GI | 192291592 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.321251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGATTGA ACCGGCGGCA AGTTCTGACC GGGCTGGCGG CGTTGCCGCT GTTGCAGGCA
AAGCCCGATC CCGCCGCGGC GGACCGCTCT TCCTCGATCG ACTTCGATCC TTGGATGGTG
CGCAAGCTGG CGCGCGAGCT GGCGAGCAAA CCTTATGAGG CGCCCGACAG CTCGTTGCCG
GCCTCGCTGA ACGATCTGAG CTACGACGCC TACCGGTCGC TGCGCTTTCG ACCCGAGCGC
GCCCTCTGGC GTGCCGAGAA CCTGCCGTTT CAGGTCCAGT TCTTCCACCG CGGCTTCCTC
TACAAGAACC GGGTGACGAT CTTCGAAGTC GCCGATGGCA AGGCGCGCCA CGTGCCGTAT
CGCGCGGACG ATTTCTCGTT CGGCGACGTC GCGCCGCCGC CGGATGCCGA TCTCGGCTTT
GCGGGGTTTC GGATTCACGC GCCGCTGCAG CGTGCGGACT ACTACGACGA GGTCAGCGCC
TTCCTCGGAG CGGCCTACTT TCGCGCCGTC ACCAAGGGCG AGCGTTACGG CCTCTCTGCG
CGCGGCCTGT CGATCGACAC CGGCCAGTCG AGCGGCGAGG AATTCCCGCT GTTCAAGACA
TTCTGGCTCG AGCGCCCTAC TCCGGGCGCA TCGTCGATGG TGGTGCATGC GCTGCTCGAC
AGCAAGAGCG TCGCCGGCGC CTACCGCTTC ACCATCCGCC CCGGCGACAC CACGGTGTTC
GACGTCGAGA TGGCGCTTTA TCCGCGCGTC GATCTGCAGC ATGCCGGACT GGCGCCGATG
ACCAGCATGT TTCTGTTCGG CCCGAACGAT CCGGCCGATA CCCCGGACTT CCGTGCCGCG
GTGCACGATT CCGACGGACT CGCGATCTTC AACGGCAGCG GCGAAGAGCT GTGGCGGCCT
CTGTGCAATC CGAGGGATCT GCAGATCAGC TCGTTCGGTG ACCGCAACCC GCGCGGCTTC
GGCCTGATGC AGCGCGAACG CAGCTTCGCT AACTATCAGG ATCTCGAATC CCGGTACGAG
CTGCGGCCGA GCCTGTGGGC CGAGCCGATC GGCGACTGGA CCGATGGCGC CGTCAAGCTG
ATCGAGATTC CCACCCGCGA AGAGGTGCAC GACAATATCG CGTCGTTCTG GGAGCCGAAG
CAGCCGCTAC GCGCCAAGGG CGAACACATC TACACCTATC GGCTGCACTG GGGACCGGAT
GCGCCGAAGC CCAAGGGGCT CGCGCGGTTC GTGCGGACCG GCATCAGCGC GCGCGGCGAC
AATGAACGGT TGTTCGTGCT CGATCTTGCC GGTGACCGGC TGAAGACCGT CGATGCCGCC
GCGGTCCGCG GCGTGGTCAC CGCCGACAAG GGCGAGATCC GCAATATCGT AACCCAGCCG
AACCCGGCGA TGGGCGGATG GCGGCTCAGC TTCGACCTCG CGCAGGCGCG AGCCCCGGTC
GAATTACGGG CGGTCGTGTG CGAGGGCGAC GCGGCGGTCT CGGAAGTTTG GCTGTACCGA
TGGACGCCGT GA
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| Protein sequence | MRLNRRQVLT GLAALPLLQA KPDPAAADRS SSIDFDPWMV RKLARELASK PYEAPDSSLP
ASLNDLSYDA YRSLRFRPER ALWRAENLPF QVQFFHRGFL YKNRVTIFEV ADGKARHVPY
RADDFSFGDV APPPDADLGF AGFRIHAPLQ RADYYDEVSA FLGAAYFRAV TKGERYGLSA
RGLSIDTGQS SGEEFPLFKT FWLERPTPGA SSMVVHALLD SKSVAGAYRF TIRPGDTTVF
DVEMALYPRV DLQHAGLAPM TSMFLFGPND PADTPDFRAA VHDSDGLAIF NGSGEELWRP
LCNPRDLQIS SFGDRNPRGF GLMQRERSFA NYQDLESRYE LRPSLWAEPI GDWTDGAVKL
IEIPTREEVH DNIASFWEPK QPLRAKGEHI YTYRLHWGPD APKPKGLARF VRTGISARGD
NERLFVLDLA GDRLKTVDAA AVRGVVTADK GEIRNIVTQP NPAMGGWRLS FDLAQARAPV
ELRAVVCEGD AAVSEVWLYR WTP
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