| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3208 |
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| Symbol | |
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| ID | 6410878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3455458 |
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| End bp | 3456867 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713085 |
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| Product | pyruvate dehydrogenase subunit beta |
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| Protein accession | YP_001992186 |
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| Protein GI | 192291581 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.410078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATCC AAGTTCTGAT GCCCGCGCTG TCGCCGACCA TGGAGAAGGG CAACCTGTCG
AAATGGCTGA AGAAGGAAGG CGACAAAGTC AAAAGCGGTG ATGTCATCGC CGAGATCGAG
ACCGACAAGG CGACGATGGA AGTCGAAGCT GCCGACGAAG GTACGCTCGG TAAGATCCTG
ATTCCCGAAG GTACTAACGA CGTCGCGGTG AACACCCCGA TCGCCACCAT CCTGGGCGAC
GGCGAAAGCG CGGCCGATGC CGACAAGGCG TCCGACCCGA CCGCACAGAG CAAGGCCTCG
CAATCGGCGC CGCCGTCGGC GGAGCCTGAG GCCGCGCAGG CGAAGTCCGC AGCGGCGCCC
GCCCAGCACG CGCCCGAAGC ACCGACGGTG TCGGCGGCTG CTGATCCGGA TATTCCTGCC
GGCACCGAGA TGGTGACGGT GACGATCCGC GAAGCGCTGC GCGACGCGAT GGCCGAGGAA
ATGCGCCGCG ATCCCGACGT GTTCGTGATG GGTGAAGAGG TCGCCGAGTA TCAGGGCGCC
TACAAGGTCA CGCAGGGGTT GTTGCAGGAG TTCGGCGACC GCCGCGTGAT CGACACACCG
ATCACCGAAC ACGGTTTTGC CGGCGTCGGC GTCGGCGCCG GCTTTGCCGG GCTGAAGCCG
ATCGTCGAGT TCATGACCTT CAACTTCGCC ATGCAGGCGA TCGACCAGAT CATCAACTCG
GCGGCGAAGA CGCTGTACAT GTCGGGCGGT CAGCTCGGCT GCTCGATCGT GTTCCGCGGT
CCGAACGGCG CCGCCTCGCG CGTCGCCGCG CAGCACAGCC AGGACTACTC GGCCTGGTAC
GCGCAGATCC CGGGCCTCAA GGTGGTGGCG CCGTATTCGG CCGCCGACGC CAAGGGCCTG
CTCAAGGCCG CGATCCGTGA TCCCAATCCG GTGATCTTCC TCGAGCACGA GATGCTGTAC
GGGCAGCACG GCGAAGTGCC GAAGCTCGAC GACTACGTGA TCCCGATCGG CAAGGCGCGC
ATCGTCCGCG AGGGTAAGGA CGTCACGCTG ATCTCGTGGT CGCACGGCAT GACCTACACG
CTGAAGGCCG CCGACGAGCT GGCGAAGGAC GGCATCTCGG CCGAAGTGAT CGACCTGCGT
ACGCTGCGTC CGCTCGACAC CGACACCATC ATCGCCTCGG TGAAGAAGAC CGGGCGCGCG
GTGACGATCG AAGAAGGCTG GCAGCAGAAC GGCGTCGGCG CCGAACTCTC TGCCCGGATC
ATGGAGCATG CCTTCGATTA CTTGGATGCG CCGGTGACTC GGGTGTCGGG CAAGGACGTG
CCGATGCCGT ACGCGGCCAA TCTCGAAAAG CTGGCATTGC CCAGCGTCGC CGAGGTGGTC
GAGGCCGCCA AAGCCGTCTG CTACAGGTAA
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| Protein sequence | MPIQVLMPAL SPTMEKGNLS KWLKKEGDKV KSGDVIAEIE TDKATMEVEA ADEGTLGKIL
IPEGTNDVAV NTPIATILGD GESAADADKA SDPTAQSKAS QSAPPSAEPE AAQAKSAAAP
AQHAPEAPTV SAAADPDIPA GTEMVTVTIR EALRDAMAEE MRRDPDVFVM GEEVAEYQGA
YKVTQGLLQE FGDRRVIDTP ITEHGFAGVG VGAGFAGLKP IVEFMTFNFA MQAIDQIINS
AAKTLYMSGG QLGCSIVFRG PNGAASRVAA QHSQDYSAWY AQIPGLKVVA PYSAADAKGL
LKAAIRDPNP VIFLEHEMLY GQHGEVPKLD DYVIPIGKAR IVREGKDVTL ISWSHGMTYT
LKAADELAKD GISAEVIDLR TLRPLDTDTI IASVKKTGRA VTIEEGWQQN GVGAELSARI
MEHAFDYLDA PVTRVSGKDV PMPYAANLEK LALPSVAEVV EAAKAVCYR
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