| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3186 |
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| Symbol | |
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| ID | 6410856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3433725 |
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| End bp | 3434162 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713063 |
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| Product | putative autotransporter |
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| Protein accession | YP_001992164 |
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| Protein GI | 192291559 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.396056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTTTCG GCGTCCGCTA TGTTGACGCC GCAAATCCGA TTTGTTGGCA GGTCGGCCCC
GCCGGCGCGC GCTACGATGC CACCACCGCG CAGGCGTTCG GCGAGATCGG CTACCGCGTG
GCGGTCGGGC AGGCCGTCGC CGAGCCGTTC GGCGGGCTGG CGCTGGTGCA TCTGCATCGC
GATGGGTTCA CCGAAGGCGG CGGCATCACC GCGCTGTCGG CGTCGAGCCG CAACGACGAC
ATTGGTTATT CGATGCTCGG CAGCCGGCTG ACGACCAGTT TCACGCTTTC GCCCGGTCTG
GTGGCGATGC CCCGGCTGGC GGCGTCCTGG CAGCACGCAT TCGGTGCCAC GGCGCCGATC
GCGGATCTGG CGTTCCGCAG CACCGGCGAG CGGGTCCGTC GCGATCAGGT GCGCGGCCAG
TTGAGTTGGC AGTTCTGA
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| Protein sequence | MGFGVRYVDA ANPICWQVGP AGARYDATTA QAFGEIGYRV AVGQAVAEPF GGLALVHLHR
DGFTEGGGIT ALSASSRNDD IGYSMLGSRL TTSFTLSPGL VAMPRLAASW QHAFGATAPI
ADLAFRSTGE RVRRDQVRGQ LSWQF
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