Gene Rpal_3154 details

Gene Information

• Locus tag: Rpal_3154
• ID: 6410824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 3399306
• End bp: 3399809
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642713032
• Product: single-stranded DNA-binding protein
• Protein accession: YP_001992133
• Protein GI: 192291528
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGGTA GCGTGAACAA GGTGATCCTG GTCGGGAATC TCGGTGCCGA TCCGGAGATC 
AAGCGGACCC AGGACGGGCG TCCGATTGCC AACCTGCGGA TCGCCACCTC GGAGTCCTGG 
CGCGATCGCG CCACCGGCGA GCGCAAGGAA AAGACCGAGT GGCATCGCGT GGTGATCTTC 
AATGAGGGAT TGTGCAAGGT CGCGGAGCAG TACCTGAGAA AGGGCGCGAA GGTTTACATC 
GAAGGCCAAC TGCAGACACG CAAATGGACC GATCAGAGCG GCGCTGAGCG CTACAGCACC 
GAGGTTGTGC TGCAGAACTT CAACTCGAAT CTGACCATGC TCGACGGACG CAGCGGCGGC 
GGAGGTGGCG GCGGCTATGG CGACGACAAC TCCGGCGGCG ATTTCGGCTC CAGCGGCCCC 
TCGGGTGGCG GCGGCGCACG GCGGCCGATG CCGGCCAGCA GCGGCGGCGG CCGCAGCGAT 
ATGGACGACG ACATTCCGTT CTGA 

 

Protein sequence

MAGSVNKVIL VGNLGADPEI KRTQDGRPIA NLRIATSESW RDRATGERKE KTEWHRVVIF 
NEGLCKVAEQ YLRKGAKVYI EGQLQTRKWT DQSGAERYST EVVLQNFNSN LTMLDGRSGG 
GGGGGYGDDN SGGDFGSSGP SGGGGARRPM PASSGGGRSD MDDDIPF