Gene Rpal_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3131 
Symbol 
ID6410802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3379258 
End bp3379746 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID642713011 
Productputative monovalent cation/H+ antiporter subunit E 
Protein accessionYP_001992112 
Protein GI192291507 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGG TGTTGCCGTT CCCGCTGATC TCGCTGTGCC TGCTGGCGAT GTGGCTGTGG 
CTCAGCCAGA GCATCGCGCT CGGGCCCATC CTGCTCGGCA GCCTGTTCGC GCTGATTGGC
GGTTGGCTAT TGAGCCTGCT GCAATCGGAC TCCGACCGCG TGCGCAATCC GGGCGCGATC
ATCCGGCTGA CCGGCCTGGT GCTGATCGAC GTGGTGCGGT CGAACATCGC GGTCGCCAGC
ATCATCCTCG GCGGCCAGCG CGACAACATT ACTTCCGGTT TCATCGACAT CCCGCTCCAG
CTGAGCAGCC GGCAGGGCCT CGCGGTGCTG GCCTGCATCA TCACCTCGAC GCCCGGCACG
CTGTGGGTGA ACTTCACCCG GGAGACTGGC GTGCTGCAGC TCCACGTGCT CGATCTGGTC
GACGAGAGCG AGTGGGTCGA CCGCATCAAG GGCCGCTACG AGCGTCTGCT GTTGGAGATA
TTCGAATGA
 
Protein sequence
MSRVLPFPLI SLCLLAMWLW LSQSIALGPI LLGSLFALIG GWLLSLLQSD SDRVRNPGAI 
IRLTGLVLID VVRSNIAVAS IILGGQRDNI TSGFIDIPLQ LSSRQGLAVL ACIITSTPGT
LWVNFTRETG VLQLHVLDLV DESEWVDRIK GRYERLLLEI FE