| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3117 |
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| Symbol | |
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| ID | 6410788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3361143 |
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| End bp | 3361931 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712997 |
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| Product | hydrolase, TatD family |
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| Protein accession | YP_001992098 |
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| Protein GI | 192291493 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0535409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTCG ACAGTCACTG CCATCTCGAC TTCCCCGACT TTGCCGACGA CCTCGCCGGC
ATCGTCGCCC GGGCCGAGGC GAGCGGGGTG GGGCGGATGG TGACGATCTC GACGCGGGTT
CGGAAGCTGC CGGACCTCGT GGCGATCGCC GAGCGGTTTC CCAACGTGTA CTGCTCGGTC
GGCACCCATC CGCATCACGC CGACGAGGAA GACGGCATCA CCACGGATGA GCTTGTGAAG
CTCGCCCAGC ACCCGAAGGT GGTGGCGTTC GGCGAGGCCG GGCTCGATTA CTTCTACGAG
ATGGGCTCGC GCGAGGCGCA GGAGCGCGGC TTCCGCGCCC ATATCGCGGC CGCGCGCGAA
ACCGGGCTGC CGCTTGTGAT CCACACCCGC GAGGCGGACG AGGATTGCGG CAAGATCCTC
GAAGACGAGA TGGGGAAGGG AGCCTTTCGC GCGGTGCTGC ATTGCTACAC CGGCGGCCGC
GACCTCGCGA TGCAGGCCAT CGATCTCGGA CTGATGATCT CCTTCACCGG CATTCTCACG
TTCAAGAAGT CGCAGGCCTT GCGCGATCTC GCCGCCGAGC TGCCAGCCGA CCGCGTCCTG
GTCGAGACCG ACTCGCCGTA TCTGGCGCCG GGCAAATATC GCGGCAAGCG CAACGAACCG
TCTTATGTAG TCGAAACCGC CAAGGTGCTG GCCGAGATCC GCGGCGTATC GCTCGACGAG
ATCGCCCGCC AGACGACCGA GAACTTCTTC CGCCTGTTCG GCAAGGTGCC GGCGCCCGCC
GCCGCATGA
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| Protein sequence | MLVDSHCHLD FPDFADDLAG IVARAEASGV GRMVTISTRV RKLPDLVAIA ERFPNVYCSV
GTHPHHADEE DGITTDELVK LAQHPKVVAF GEAGLDYFYE MGSREAQERG FRAHIAAARE
TGLPLVIHTR EADEDCGKIL EDEMGKGAFR AVLHCYTGGR DLAMQAIDLG LMISFTGILT
FKKSQALRDL AAELPADRVL VETDSPYLAP GKYRGKRNEP SYVVETAKVL AEIRGVSLDE
IARQTTENFF RLFGKVPAPA AA
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