| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3087 |
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| Symbol | |
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| ID | 6410758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3329804 |
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| End bp | 3330772 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712967 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001992068 |
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| Protein GI | 192291463 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATT TCGCCGGCAG GATTGCCGTG ATCACCGGCG GCGGCGCGGG CATGGGCCGC
GAACTCGCCC GCCAGCTCGT CGCCGAGGGC TGCCACGTTG CGATCTGCGA TGTTTCTCAA
GCCGCCATGG ATGAAACGCG GCGGCTGTGC GAGGCCGACC GCCTGCCGCA GGGCGTGCGG
ATCACCACCC ACGTCGTCGA CGTCTCCGAC GAAGCCCAGA TGCAGCGGTT TCGCGACGAG
GTCACCGCGC AGCATGCCAC CGGCTGCATC CATCTGTTGT TCAACAACGC TGGGATCGGC
GGCGGCGGCA GCATGATCGC CAATTCCCGC GAACAGTGGG AGCGCACCTT CAACATCTGC
TGGGGCGGCG TGTATCTCGG CACCCGCATT TTCCTGCCGA TGCTGATCGC GGCCGACCAA
GGCCACATCG TCAACACCTC CAGCGTCAAC GGCTTCTGGG CCTCGCTCGG ACCCACGGTG
CCACACACCG CCTACAGCGC GGCGAAGTTT GCCGTGAAAG GATTTTCTGA AGCGCTGATC
GGCGATCTCC GGCTGAATGC GCCGCATGTC CGCTGCTCGG TGGTGATGCC GGGCCACATC
GGCACGTCGA TCCTGACCAA TTCTCGGCGG ATCCAGCTGG GCGACGGCTC GGACGAATTC
AGCGCCGAGG AAGTCGCCGG CATGCGCCAG CGGCTGTCGG CGGCCGGAAT CGATCTGTCG
CAGATGTCGG ACGACGACCT CCGCGCAATG GCGAAGGAGC GAGCGCGAAG CTTTCAGGAA
GATGCGCCGA CCAGCGCCGC CGCGGCGGCC CGCAGCATCC TCGATGGCGT GCGCCGCGGT
GACTGGCGCA TCCTGGTCGG CGACGATGCG CATGCGCTCG ACGCCCGCGT TCGCGCGATG
CCGGAGCGTG CCTACGAGGT CGAGTTCTAT CAGAGCTTCG CGGCCGAAGT CGGCTGGCGG
CTCGGCTGA
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| Protein sequence | MKDFAGRIAV ITGGGAGMGR ELARQLVAEG CHVAICDVSQ AAMDETRRLC EADRLPQGVR
ITTHVVDVSD EAQMQRFRDE VTAQHATGCI HLLFNNAGIG GGGSMIANSR EQWERTFNIC
WGGVYLGTRI FLPMLIAADQ GHIVNTSSVN GFWASLGPTV PHTAYSAAKF AVKGFSEALI
GDLRLNAPHV RCSVVMPGHI GTSILTNSRR IQLGDGSDEF SAEEVAGMRQ RLSAAGIDLS
QMSDDDLRAM AKERARSFQE DAPTSAAAAA RSILDGVRRG DWRILVGDDA HALDARVRAM
PERAYEVEFY QSFAAEVGWR LG
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