Gene Rpal_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3063 
Symbol 
ID6410734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3309418 
End bp3310485 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content62% 
IMG OID642712943 
Producthypothetical protein 
Protein accessionYP_001992044 
Protein GI192291439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0629375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTGA CCAGCTACGG GGTTAACAAC ACGCTTTCCA ACAAGCTTTG GGCGAAGAAG 
CTCAACGCGG AAGCTCTCAA GCCGACTTTC TTCGGGAAGT TCATGGGCGA GGGCTCGAAC
AACATGATCC AGGTAAAGAC CGAGCTGGAT CAGAACGCCG GCGATCAGGT GACCGTCGGC
CTCCGTGTCC AGCTCTCCGG CGACGGCACC ACGGAAGGCC AGACCCAGGA GGGCAACGAA
GAAAGCCTTT CGACCTACAG CGACAAGCTG ACCATCAACG AGCTGATGCA CGCCGTGCGC
GTGAAGAACA AGGGTTCGAT CGACGCGCAG CGCGTGCCGT TCAACCTGCG GAACGAGGGT
AAGGAAGGTC TGACCGACTG GTTCGCCAAT CGCTTCGACA CCTGCATGGC CAACCACCTC
GCCGGAAATA CGCTAGTCGT CGATCCGCGC TACACCGGCA ACAACGCGAT CACGGCGCCG
ACCAATTTCT GGCGCAAGGG CGGTGCGACC GACGACGCCA CGATCAACGG CGACAATACG
GCGATCTTCG ATCTCAAGTG CGTTGACGCG ATGGTCGAGC GCGCGAAGCT CGCTTCGCCG
CTGATCCGCC CGTTCATGGT CGGCGGCAAG AAGAAGTACG TAATGTTCCT GCACCCGTTC
CAGGTGACGG ACATGCGGAA CAACACCGGC GCCGGCCAGT GGCTCGACAT CCAGAAGGCA
GCGCTTGCGG GCGGCGTCGG CGATAAGTCG CCGATCTATA CTGGCGCGCT CGGCGAGTAC
AACGACGTCG TGTTGCACGA ATGGGTGCGG CTGCCGAACG GCATTTCCAA TGCCGGTGCG
GTGCAGCCGA ATACCCGCCG CGCCGTGATG TGCGGTGCGC AGGCCGGTTT GGTCGGCTTC
GGCAAGGAGT ACGCGAAGGG CTCCCACTTC AAGTGGGTCG AAGAGCTGTT CGACTACGAA
CGCGAACTCG GCGTTTCGGC GCAAACCGTG TGGGGCATCA AGAAGTCTGC CTTCAACGGC
CAGGACTTCG GCGCACTGGT CGCCACCACC TACGCGGTCG CCCACTGA
 
Protein sequence
MTVTSYGVNN TLSNKLWAKK LNAEALKPTF FGKFMGEGSN NMIQVKTELD QNAGDQVTVG 
LRVQLSGDGT TEGQTQEGNE ESLSTYSDKL TINELMHAVR VKNKGSIDAQ RVPFNLRNEG
KEGLTDWFAN RFDTCMANHL AGNTLVVDPR YTGNNAITAP TNFWRKGGAT DDATINGDNT
AIFDLKCVDA MVERAKLASP LIRPFMVGGK KKYVMFLHPF QVTDMRNNTG AGQWLDIQKA
ALAGGVGDKS PIYTGALGEY NDVVLHEWVR LPNGISNAGA VQPNTRRAVM CGAQAGLVGF
GKEYAKGSHF KWVEELFDYE RELGVSAQTV WGIKKSAFNG QDFGALVATT YAVAH