| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2979 |
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| Symbol | |
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| ID | 6410649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3249592 |
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| End bp | 3251022 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712860 |
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| Product | Citrate transporter |
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| Protein accession | YP_001991962 |
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| Protein GI | 192291357 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.146428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAC GCTATTCCCG CCGATTTCGC CTGCTAATTC CGCTGCTCGT CTTCGCTGCG
CTTCCGGGGC CGGCGCAGGC GGCCGACCTC GATGGCGCGG CGCTCGGCTG GGCGTGGGGC
GTGCCGTTCG CCGGCATCCT CCTGTCGATC GCGCTCGGAC CGCTGCTGGC GCCGAAGATC
TGGCACGCGC ATTACGGCAA AATCGCCGCC GGCTGGGGCG TGCTGGCACT GGCGCCGATT
GCGGTGGTGT ATGGCTGGGA CATCGCGCTG GCGTCGCTGA TCCATGCGCT GCTCGCCGAG
TATCTCAGCT TCATCGTGCT GCTGTTCGCG CTGTTCACGG TGTCAGGCGG CATTCTGGTC
ACCGGCACGA TCCGAGCGAC GCCATTGATC AACACCGGCA TGCTCGCGGT CGGCACCGCC
TGCGCCAGCC TGATCGGCAC CACCGGCGCC GCGATGGTGC TGATCCGGCC GCTGATCCGC
GCCAATGCCG GGCGGCAGCA CAACGTCCAT GTCGTGGTGT TCTTCATCAT CCTGGTCGCC
AACATCGGCG GCGCACTGTC GCCGCTTGGC GATCCGCCGC TGTTCGTCGG CTTCCTGCGC
GGCGTCGATT TCTTCTGGCC GGTGCAGCAC CTGTGGCAGC AGACGCTGAT CGTGGCCGGC
GTGCTGCTCG TAGTGTTCTA TCTGCTCGAC CGCTGGTACG CGCGGCATGA TGCGCCGGCC
AAGACGTCAG AAGCGCCGAT CGGATTTCGC GGCGGCATCA ATTTCCTGCT GATCGCCGGC
ATCATCGCGA CCATTCTGGC CTGCGCGCAG TGGCGGCCGG GCATCGAGTT CGACGTTTAC
GGCACCAAGG TCGCGCTGCA GAATCTGGTG CGCGACGCGA TGCTGGTGGT GCTGGCGCTG
CTGTCGCTGT GGTGGACCGC CGACGAGCAC CGCGCCGCCA ACGGCTTCAC CTGGGAGCCG
ATCCGCGAAG TCGCCAAGCT GTTCGCCGGG ATCTTCGTCG CCATCATTCC GGTGCTGGCG
ATGCTGCACG CCGGCAAGAG CGGGCTGTTT GCGCCGCTGC TGGAGGCGGT GACCGCGAGC
GACGGCACGC CCCGCGAGGT GCCTTACTTC TGGTTCACCG GGCTGTTGTC GGCAGTGCTC
GACAATGCGC CGACCTATCT GGTGTTCTTC GAACTGGCAG GCGGCCGGCC CGCCGAGCTG
ATGGGGCCGC TCGCCGGCAC GCTCGCGGCG ATCTCGATGG GCTCGGTGTA TATGGGCGCG
CTGACCTATG TCGGTAACGC GCCGAACTTC ATGGTGTACG CCATCGCCAC CGAGCGCGGC
ATCAAGATGC CGGGCTTCTT CGGCTACGCG CTGCGGGCCG GCCTCGTGCT GATCCCGCTG
TTCCTGCTGT TGACGTTCCT GCCGATCGTC CCGAACCTGC GGCTGCACTG A
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| Protein sequence | MIERYSRRFR LLIPLLVFAA LPGPAQAADL DGAALGWAWG VPFAGILLSI ALGPLLAPKI
WHAHYGKIAA GWGVLALAPI AVVYGWDIAL ASLIHALLAE YLSFIVLLFA LFTVSGGILV
TGTIRATPLI NTGMLAVGTA CASLIGTTGA AMVLIRPLIR ANAGRQHNVH VVVFFIILVA
NIGGALSPLG DPPLFVGFLR GVDFFWPVQH LWQQTLIVAG VLLVVFYLLD RWYARHDAPA
KTSEAPIGFR GGINFLLIAG IIATILACAQ WRPGIEFDVY GTKVALQNLV RDAMLVVLAL
LSLWWTADEH RAANGFTWEP IREVAKLFAG IFVAIIPVLA MLHAGKSGLF APLLEAVTAS
DGTPREVPYF WFTGLLSAVL DNAPTYLVFF ELAGGRPAEL MGPLAGTLAA ISMGSVYMGA
LTYVGNAPNF MVYAIATERG IKMPGFFGYA LRAGLVLIPL FLLLTFLPIV PNLRLH
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