| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2968 |
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| Symbol | |
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| ID | 6410638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3238174 |
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| End bp | 3240456 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712849 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001991951 |
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| Protein GI | 192291346 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCAG GACGCCAGGG TTCGAAGCAG ATGGAGCAGG CCGGCGGCGC AGCTGCCGTG
GCCGAGCCGA CTGCTGTCGC CAAACCCCGA TCCCGTGCCC GGATGATGCG GCAATACGAT
CTGGTCGAAC GGGTCCGGTC GTACAATCCC AATACCGACG AGGATCTCCT CAACCGGGCG
TACGTCTACG CCATGATGGC GCACGGGGAG CAAACCCGCG CCTCGGGCGA CCCGTACTTC
TCGCACCCGC TCGAAGTCGC CGCGATCCTG ACCAACCTCA AGCTCGACGA CGCCACCATC
GTCGCCGCGC TGTTGCACGA TACCATCGAG GACACCGAGG CGACCCGGAC CGAGATCGAC
ACCATGTTCG GTCCGGAGAT CGGCGCCCTG GTCGAGGGGC TGACCAAGCT GAAGCGTCTC
GAGCTGGTGT CGCGTGAGGC CAAGCAGGCT GAAAATCTGC GCAAGCTGCT GCTGGCGATC
GCCGACGACG TCCGCGTGCT GCTGATCAAG CTGGCCGACC GCCTGCACAA CATGCGCACG
CTGGAGTTCG TGCCGCCCGC CTCGCGTCAG CGCATCGCCG AGGAAACGCT CGACATCTAC
GCGCCGCTCG CAGGCCGCAT GGGCATGCAG GAGATGCGCG AGGAGCTCGA GGATCTGTCG
TTCCGCAGCC TCGATCCGGA AGCCTTCACG GTCGTGATGC AGCGGCTGGA TGCGCTGGCC
GAACGCAACC GCAATCTCAT CGGCGAGATC GAAAGCCAGC TCTCCGCCAA TCTCGCCCGC
CATGGCATCA CCGCCGAGGT GACCGGGCGT CGGAAGCGGC CGTTTTCGAT CTGGACCAAG
ATGGAGCGCA AGTCGGTCGG CTTCGAGCAG CTCTCCGACA TCTACGGCTT CCGCGTCGTC
CTCGATAACG TCGAGGCCTG CTATCGCGCG CTCGGCGTCG TGCACACCAC CTGGCCGATG
GTGCCGGGCC GGTTCAAGGA CTACATCTCG ACACCGAAGC AGAATGACTA TCGTTCGCTG
CACACCACAG TGATCGGTCC GGGCCAACAG CGCGTCGAGC TGCAGTTCCG CACCCGCGAG
ATGAATCAGA TCGCGGAATA CGGCATCGCC GCGCACGCGT TCTATAAGGA CGGCGTCGGT
TCGCCGACCG AGCTGCTCAA CCGCGAATCC AATGCGTTCG CCTGGCTCCG TCACACCATC
GAGATGCTGT CGGAGAGCTC GAACCCCGAG GAATTCCTCG AGCACACCAA GCTCGAACTG
TTCCACGACC AGGTGTTCTG CTTCACCCCG AAGGGCAAGC TGATCGCGCT GCCGCGCAAA
GCCAATGTCG TCGACTTCGC CTATGCGGTG CACACCGACG TCGGCAACAG TGCGGTCGGC
TGCAAGATCA ACGGCAAGTT CGCGCCGCTG TCGTCCGAGC TGCAGAACGG CGACGAAGTC
GAAGTGCTGA CCTCGCCGGT GCAGTCGGCG CCGCCGGCGG CATGGGAATC GCTCGCCGTC
ACCGGCAAGG CACGGGCGGC GATCCGCCGT GCGACGCGCG TGGCGATGCG CGATCAGTAT
GCCGGCCTCG GCCGCCGCAT CGTCGAGCGT TTGTTTGCCC GCGCCAAGAT CGAATATGCC
GACGACAAGC TGAAAGGCGC GCTGCCTCGG CTGGCGCGTG CCTCGGTCGA GGACGTGATG
GCGTCGGTCG GCCGGGGTGA GATGAAGGCG TCCGACGTCG CCCGGGCGAT GTACCCGGAC
TACAAGGAAG AGCGCATCGC GCGGTTCGGC GGCAAGAAGG ATGTGCCGGA CAAGGTGATT
GGCAAGGCTC CCGAGACCGG CAAGGTCAGC TCGGTGATTC CGATCGGCGG CCTGCACTCG
GGATTGCCGG TGAAGTTCGC GCCGAACGGC GGCGCTGTGC CGGGCGACCG CATCGTCGGC
ATCGTCACGC CGGGCGAGGG GATCACCATC TATCCGATCC AGTCGCCGGA CCTGAAGGAG
TTCGAGGAAG AGCCGGAGCG CTGGCTCGAC GTGAAGTGGG ACATCGACGA GACCACGCCG
CAGCGCTTCC CTGCGCGGTT GTTCGTGCAG AATGTCAACG AGCCCGGCAG CCTCGCGCAG
ATCGCCGGCG TCATCGCCGA ACACGACGGC AACATCGACA ACATCAACAT GAGCCGGCGG
TCCCCCGACT TCACCGAGCT CACCATCGAT CTCGAGGTCT ATGACCTCAA GCACCTCAGC
GCGATCATCG CCCAGTTGCG CGCCAAGGAC GTCGTCGCTC ACGTCGAGCG GGTCAACGGC
TGA
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| Protein sequence | MASGRQGSKQ MEQAGGAAAV AEPTAVAKPR SRARMMRQYD LVERVRSYNP NTDEDLLNRA
YVYAMMAHGE QTRASGDPYF SHPLEVAAIL TNLKLDDATI VAALLHDTIE DTEATRTEID
TMFGPEIGAL VEGLTKLKRL ELVSREAKQA ENLRKLLLAI ADDVRVLLIK LADRLHNMRT
LEFVPPASRQ RIAEETLDIY APLAGRMGMQ EMREELEDLS FRSLDPEAFT VVMQRLDALA
ERNRNLIGEI ESQLSANLAR HGITAEVTGR RKRPFSIWTK MERKSVGFEQ LSDIYGFRVV
LDNVEACYRA LGVVHTTWPM VPGRFKDYIS TPKQNDYRSL HTTVIGPGQQ RVELQFRTRE
MNQIAEYGIA AHAFYKDGVG SPTELLNRES NAFAWLRHTI EMLSESSNPE EFLEHTKLEL
FHDQVFCFTP KGKLIALPRK ANVVDFAYAV HTDVGNSAVG CKINGKFAPL SSELQNGDEV
EVLTSPVQSA PPAAWESLAV TGKARAAIRR ATRVAMRDQY AGLGRRIVER LFARAKIEYA
DDKLKGALPR LARASVEDVM ASVGRGEMKA SDVARAMYPD YKEERIARFG GKKDVPDKVI
GKAPETGKVS SVIPIGGLHS GLPVKFAPNG GAVPGDRIVG IVTPGEGITI YPIQSPDLKE
FEEEPERWLD VKWDIDETTP QRFPARLFVQ NVNEPGSLAQ IAGVIAEHDG NIDNINMSRR
SPDFTELTID LEVYDLKHLS AIIAQLRAKD VVAHVERVNG
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