| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2950 |
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| Symbol | rimO |
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| ID | 6410620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3222952 |
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| End bp | 3224277 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712831 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001991933 |
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| Protein GI | 192291328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGG CCACCGCGCC CAAGATCAGT TTTGTTTCGC TGGGATGCCC CAAGGCCCTG
GTCGATTCCG AGCGCATCAT CACCCGGTTG CGCGCCGAGG GCTACGAGCT GGCGCGCAAG
CACGACGGCG CGGACCTCGT CATCGTCAAC ACCTGCGGCT TCCTGGACAG TGCCAAGCAG
GAATCGCTGG CGGCGATCGG CGAAGCGATG GCGACCAACG GCAAGGTGAT CGTCACCGGC
TGCATGGGCG CCGAGCCGGA GCAGATCGAA GCCGCCTATC CCGGCGTGCT GTCGATCACC
GGCCCGCAGC AATATGAGAG CGTGCTCGAC GCGGTGCATC GCGCCCGGCC GGCGCTGCAC
AACCCGCATC TCGATCTGGT CCCCCCGCAG GGCGTGCGGC TAACGCCGCG GCACTATGCG
TATTTGAAGA TCTCAGAGGG CTGCAACAAT CGCTGCAGCT TCTGCATCAT CCCGAAGCTG
CGCGGCGATC TGGTATCACG CCCGGCCGGC GACGTGCTGC GCGAGGCCGA GAAGCTGGTC
GCCGCCGGCG TCAAGGAGCT GCTGGTGATC TCGCAGGACA CCTCGGCCTA CGGCGTCGAT
GTGAAGTACG CAGAGAGCCC GTGGAAGGAC CGTGCCGTCC GCGCCAAATT CCTCGATCTG
GCCAGCGAAC TCGGGGAGCT CGGCGCCTGG GTGCGGCTGC ATTACGTCTA TCCGTATCCG
CATGTCGACG AGGTGATCGG CTTGATGGCG GACGGCAAGG TGCTGCCTTA TCTCGACATC
CCATTCCAGC ACGCCAGCCC CGACGTGCTG AAGCTGATGA AGCGCCCGGC CGCTCAGGAT
AAGACGCTCG ACCGGATCAA GCGCTGGCGC GAGCAGTGCC CGGATCTGGC GCTGCGCTCG
ACCTTCATTG TGGGCTTCCC CGGCGAGACC GAGCGCGATT TCGAATTCCT GCTCGAATGG
CTCGACGAAG CAGAAATCGA TCGTCTCGGC GCGTTCAAAT ACGAGCCGGT CGCCGGCGCA
CCGTCCAACG CCCTGCCCGA TCAGATCGCG GACGAGGTCA AGCAGGAGCG CTGGAACAGG
CTGATGGCGC GGCAGCAGGC GATCTCCGCC CGCCGGCTGA AGCGCAAGGT CGGCACCCGC
CAGCAGGTGA TCATCGACGA GATCGGCCCG ACCGTTACCA AAGGCCGCTC CAAGGCCGAC
GCGCCGGAGA TCGACGGCGC CGTCTATCTG TCGAGCCGCC GCCCGCTGCG CGTCGGCGAA
ATCGTCACCG CCAAGATCGA CCGCGCCGAC GCGTACGACC TGCACGGGAC CGTGGCGGGG
TTCTAA
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| Protein sequence | MQQATAPKIS FVSLGCPKAL VDSERIITRL RAEGYELARK HDGADLVIVN TCGFLDSAKQ
ESLAAIGEAM ATNGKVIVTG CMGAEPEQIE AAYPGVLSIT GPQQYESVLD AVHRARPALH
NPHLDLVPPQ GVRLTPRHYA YLKISEGCNN RCSFCIIPKL RGDLVSRPAG DVLREAEKLV
AAGVKELLVI SQDTSAYGVD VKYAESPWKD RAVRAKFLDL ASELGELGAW VRLHYVYPYP
HVDEVIGLMA DGKVLPYLDI PFQHASPDVL KLMKRPAAQD KTLDRIKRWR EQCPDLALRS
TFIVGFPGET ERDFEFLLEW LDEAEIDRLG AFKYEPVAGA PSNALPDQIA DEVKQERWNR
LMARQQAISA RRLKRKVGTR QQVIIDEIGP TVTKGRSKAD APEIDGAVYL SSRRPLRVGE
IVTAKIDRAD AYDLHGTVAG F
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