Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2945 |
Symbol | |
ID | 6410615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3217966 |
End bp | 3218922 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712826 |
Product | Auxin Efflux Carrier |
Protein accession | YP_001991928 |
Protein GI | 192291323 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGATA TTCTCAACCT CGCTCTGCCG TATTTCGGTC TGATCTTCGT CGGCTTTGCC TGCGGACGCT GGAAGAAACT GCCCGAACAG GGGCTGGTTT GGATGAATTT TTTCCTCGTA TTCGTCTCCC TGCCGGCGCT GTTCTTCCGG ATCATGTCGA AGACGCCGTT CGAGGAACTG AACAACCTGC CGTTTGTGCT GGCGACCACG CTGGCAACCG CGATCGCCTT CTTCCTGTCC GGGATGCTGG GCCGGCTGAT CGGCAAGCTG TCGATGCGGG AAGCGACGAT GGCGGCGCTG TCCGGCGGCT ACGGCAATAT CGGCTATATG GGGCCGGGCT TGGCGCTGGC GGTGCTTGGC ACGCAGGCGG CGGCGCCGAC CGCGTTGATC TTCTGTTTCG ACACCATCTT CCTGTTTTCG ATCGTGCCGC TCGGCATGGC GCTGACCGCC GCCGACAAAC GGCCTCTGAT CCCGACCATC ATCGCGGTGC TGCGCGAAAT CCTGTTCCAC CCACTGATCG TCGCCGCGTA TTGCGGCGCG GCGGCCGCAG CGTTTCATGT CGAGCTGCCG GTCGCGGTCG ATAAGATGCT GGCGTTTCTG CAGAACGCCG CTGCTCCCGT GGCGCTGTTC ACGCTCGGCG TCACCGTTGC GCTACGGCCG TTCGGCCGGG TGCCGTGGGA GATCCCGAGC CTGGTGGCAG TCAAGCTGCT GCTGCACCCG GTGATCGTGT TTTGTCTGGT GCTGGCGTTC GGGCCGTTCT CGCCCGAATG GGCGGCTACT GCGGTGCTGA TGGCGTCACT GCCGCCGGCG CTGAACGTGT TCGTGATCGC CCGCCAATAC AATACCTGGG TAGAGCCGGC ATCGGTCGCG GTGCTGATCG GCACCTTCGT GTCGGTGGTG ACGCTCACCA CCGTGATGTG GCTGATCCGG ACCGGTCAGA TCCCGTTCCC CGGCTAG
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Protein sequence | MIDILNLALP YFGLIFVGFA CGRWKKLPEQ GLVWMNFFLV FVSLPALFFR IMSKTPFEEL NNLPFVLATT LATAIAFFLS GMLGRLIGKL SMREATMAAL SGGYGNIGYM GPGLALAVLG TQAAAPTALI FCFDTIFLFS IVPLGMALTA ADKRPLIPTI IAVLREILFH PLIVAAYCGA AAAAFHVELP VAVDKMLAFL QNAAAPVALF TLGVTVALRP FGRVPWEIPS LVAVKLLLHP VIVFCLVLAF GPFSPEWAAT AVLMASLPPA LNVFVIARQY NTWVEPASVA VLIGTFVSVV TLTTVMWLIR TGQIPFPG
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