| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2941 |
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| Symbol | |
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| ID | 6410611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3213862 |
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| End bp | 3215742 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712822 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001991924 |
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| Protein GI | 192291319 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGACGCG CCGAATCAGA TCATCGCTTC ATCCGCCGGA TCAAGGCCGT TGCCGCCGCG
CTCGCGATCG GTACCGGCTG CTTCACCGGC GTAACGACGG CCGGCGCCGA GTCGGTCGTG
ACTCCGGCAT CCGGATTCGT CAGCCACGCC ATCGCGATGC ACGGCAAGCC CGCGCAGCCG
GCCGACTTTA CCGCGATGCC CTACGTCAAT CCGGATGCCC CCAAGGGCGG CCGGATGATT
GCCAGCGTCG TCGGCGCCTT CGACAGCCTC AATCCGCTGA TCGTCAAAGG CATCGCAGTC
CAGCAGATGC GCGGCTACGT GATCGAGAGC CTGCTGGCGC GCGGCCACGA CGAGCCGTTC
ACCTTGTACG GCCTGCTCGC GCGCTCGGTC GAAACCGACG ACATTCGCAG CTACGTCACA
TTTCGGATCG ATCCGCGCGC CCGGTTTGCC GACGGCAAGC CGGTCACCGC CGAGGACGTG
CTGTTCTCCT GGAAGCTACT CCGCGACAAG GGCCGGCCGA ACCTGCGCTT GTATTACCGC
AAGGTCGCCA GCGCCGAAGC GCTCGATCCC CTCACCGTCC GGTTCGACTT CGGCGGCGCG
CCGGACCGCG AGCTGCCACT AATCCTGGGC CTGATGCCGG TGCTGCCGCA CCACGCGGTC
GAGCCCGACA GCTTCGAAGA AACCTCCCTC AAGCCGCCGC TCGGCTCCGG CCCGTACCGT
GTCACCCACG TTCAGGCCGG TACCAGCGTG ACCCTGACGC GCGATCCGAA CTATTGGGGC
CGTGATCTGC CGATCAACCG CGGCCTGTGG AATTTCGACG AAGTGCGGAT CGATTACTTC
CGGGAGTCCA ATGCGCAGTT CGAAGCATTC AAACGCGGCC TCTACGACTT CCGCGTCGAG
ACCGATCCGC TACGCTGGAG CGAAGGTTAC GACTTCCCCG CCGCCCGTCG CGGTGACGTG
ATCCGGGACG CAATCAAACC GGGCACGCCG GAGCCGACCG ACACGCTGGT GTTCAACACC
CGCCGGCCGG TGTTTGCCGA CGTCCGGGTG CGTGAGGCGC TGCTGAACCT GTTCGACTTC
GAATGGATCA ATCGCAACTA CTTCTTCGGC CTCTACACCC GCACCGCAGG CTTCTTCGGA
GGCTCGGAGC TGTCGGCCTA TGGCCGCGCG GCTGACGAAG GCGAGCGCAA GCTGCTGCAG
CCGTATCTGC CTCGGCTCCG CGCCGACATC CTCGACGGCA GTTTCCGGCT CCCGGAGAGT
GACGGTTCAG GCCGCGACCG CGCCGGCCTG CGCCGGGCCC TCAATCTGCT GGAGCAGGCC
GGCTACCAGC TCGACGGCAC GGTCCTGCGC AAACGCGACA CCCGCCAGCC CCTCACCTTC
GAGCTGCTGG TGACGACGCG GGAGCAGGAG CGGATCGCGC TGGCGTTCGC CCGTGACCTC
AAGCGCGCCG GCATCACCGT GTCGGTCCGC ACCGTGGATG CCGTGCAGTT CGATCAGCGC
CGCCTCGCCT ATGACTTCGA TATGATCCCG AACCGCTGGG ACCAGTCGCT GTCGCCCGGC
AACGAGCAGT CGTTTTACTG GGGCAGCGAC GCCGCCGAGA CCCCGGGCAC CCGCAACTAC
ATGGGCGCCA AGGATCCGGC GATCGACGCG ATGATTGCCG CGCTGCTACG CGCCCGCGGC
CGCACCGATT TCGTCGACGC CGTGCGCGCG CTCGATCGCG TCCTGATCTC GGGGTTTTAC
GTGGTCCCTG TGTACAGCGT GCGTGAGCAA TGGATCGCGC GCTGGAATCG TTTAGAACGT
CCAAAGGCCA CTGCCCTGAC GGGTTATCTT CCCGAAACAT GGTGGTATCG GCCGCCGCCG
CAGCAACCGC CGCAGAGGTG A
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| Protein sequence | MGRAESDHRF IRRIKAVAAA LAIGTGCFTG VTTAGAESVV TPASGFVSHA IAMHGKPAQP
ADFTAMPYVN PDAPKGGRMI ASVVGAFDSL NPLIVKGIAV QQMRGYVIES LLARGHDEPF
TLYGLLARSV ETDDIRSYVT FRIDPRARFA DGKPVTAEDV LFSWKLLRDK GRPNLRLYYR
KVASAEALDP LTVRFDFGGA PDRELPLILG LMPVLPHHAV EPDSFEETSL KPPLGSGPYR
VTHVQAGTSV TLTRDPNYWG RDLPINRGLW NFDEVRIDYF RESNAQFEAF KRGLYDFRVE
TDPLRWSEGY DFPAARRGDV IRDAIKPGTP EPTDTLVFNT RRPVFADVRV REALLNLFDF
EWINRNYFFG LYTRTAGFFG GSELSAYGRA ADEGERKLLQ PYLPRLRADI LDGSFRLPES
DGSGRDRAGL RRALNLLEQA GYQLDGTVLR KRDTRQPLTF ELLVTTREQE RIALAFARDL
KRAGITVSVR TVDAVQFDQR RLAYDFDMIP NRWDQSLSPG NEQSFYWGSD AAETPGTRNY
MGAKDPAIDA MIAALLRARG RTDFVDAVRA LDRVLISGFY VVPVYSVREQ WIARWNRLER
PKATALTGYL PETWWYRPPP QQPPQR
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