Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2893 |
Symbol | |
ID | 6410562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3155783 |
End bp | 3156562 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712773 |
Product | ABC transporter related |
Protein accession | YP_001991876 |
Protein GI | 192291271 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.767338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTGC TCGACGGCGT CGACAAGACC TACCCCAACG GCGTTCACGC CCTGCAATCG TTCTCCGCGA GGGTCAATCT CGGCGAGATC GTCGCGGTGA TCGGCGGCTC GGGCTGCGGC AAGTCGACCT TGCTGCGGGC GATCGCCGGT CTCGATCGGG CGACCGCCGG CACCATTGTG CTGGACGGCG AAACCATCAC GGCGCCGCAC CCTAAGATCG GCATCATTTT TCAGGAACCA CGGCTGCTGC CATGGCTGAG CGTCGCCGAC AACGTCGGCT TTGGTCTCGA ACAGCTGCCG CGATCGGACC GCCACGCTCG CGTCGCCGCC GCACTTGCCC GAGTGGGACT GGCCGACAAG GCGAAGGCGT GGCCCCGCGA ACTGTCTGGC GGCCAAGCCC AGCGCGTTGC GATCGCACGG GCGCTAGTGC CGCAGCCGGA AGTCATTCTG CTCGACGAGC CGTTCTCGGC GCTCGACGCT TTCACCCGCG CCGATCTGCA GGATCACCTG CTCGATCTCT GGGCCGATAC CCGGCCGACG CTGATCCTGG TGACCCACGA CGTCGAGGAA GCCGTGGCGC TCGCCAATCG CGTCTTGGTG ATGCGGCCGA GGCCGGGACG GCTGTTCGAG GAAATAGCGG TCGACCTGCC GCGTCCACGC CACCGCACCT CGGCGGCGTT CGAAGACCTC AAGCACGCCA TCCTGCATTC ACTCGATCGC TCGCTGCAGC GGACCGGACG CCGGGCCGAC GATTTGCTCG TCGAGGGCGC CGGGATATAA
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Protein sequence | MLVLDGVDKT YPNGVHALQS FSARVNLGEI VAVIGGSGCG KSTLLRAIAG LDRATAGTIV LDGETITAPH PKIGIIFQEP RLLPWLSVAD NVGFGLEQLP RSDRHARVAA ALARVGLADK AKAWPRELSG GQAQRVAIAR ALVPQPEVIL LDEPFSALDA FTRADLQDHL LDLWADTRPT LILVTHDVEE AVALANRVLV MRPRPGRLFE EIAVDLPRPR HRTSAAFEDL KHAILHSLDR SLQRTGRRAD DLLVEGAGI
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