Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2887 |
Symbol | |
ID | 6410556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3149107 |
End bp | 3150465 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642712767 |
Product | oxidoreductase/nitrogenase component 1 |
Protein accession | YP_001991870 |
Protein GI | 192291265 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.513277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGAAGG CACTTCAGCC GCCGACCCGG GAGCGGAGAC TCAATGGCGT CAGTGCCTAT TTGGGCGACG TCGCGTCCTT GATCGCTGAA CTCGAAGCCG GGCCACCCGC GTCACGGATT CGCACGTTCT CGCAAGTTGC CAGCGATGAC GTGTCGATCG CGTTGCGCGT TCTGGCAGAA GTTGAGGGGC TGGGGATCAT CGTACACGGT GCGCGGGGCT GCGCCGGAGC GCTGGTGCGC AGTCGCCCGG GCCGTCCATG GGCGGTCACC AACCTCGATC AGCGCGACAC CATTCTCGGC GCAGACGGAA ATCTCGCTCG GACGCTACGT CGACTGCATC AACGCCATCG CCCCTGGGGA ATTGTCGTGG TGGCGACGCC CGTCGTTGCG ATCAATAACG ACGACATCCA GGCGGTGGCT CAAGAGCTGA GTGACGAACT CGGCATTCCG GTCGTCGAGT TGCGGACGGA TGGATTCCGT TCGCGGATCG GTGCCACGGG CTACGATATT GCGAGCGCGG CTCTTGCGTC CCTGGTGCCG CCACAGCACG GCCGTCGGCG CGACCTGATC AATCTGCTGG CTTTTGAGCG GGGCCCGGGC CTCACCGCTG TGGTGCAACA GCTTGCCGGG CTTGGGCTCG AGGTGAATCT GGTGCCGGCG GGGGCCGGCC AGGAGGCGTT CGCCAAGGCG GCGCAAGCGG TCCTCAGCGT CGCGGTGTTT CAGGACGAGG CCGACGTGCT GCGCCGCGAA CTCGACCGGC TGCACCGCGT GCCGTTCCTG CATCTGCCGC CGCCGATCGG TTCTACTGGT GCGCTGCGGT TCGTCGAAGC CGTCGCTGAG GCAACCGAGC GGCCGCTCCC GATCCGGATC GATGATCGCA TCAGCACCGA CCTGCTGGAG GACCGCCGTG TGGTGATTGC GCTGCCGCCA TCTCAGGCGC TGGCGGTCGC GGAGCTTGTG GTGCAGTTCG GCGGCCGGAT TGCCGGGATC AGCGTCGACT GGATCGACAG CCTTCATGTC GAGGGGCTGA AGGCCCTGAC CAATGCAGCG ACCGTCGCTC TGCATGTCGG GGCGGGGCAG GCGTTTGAAT TGGTGAACTG GCTCGGCAAG ATTGAGCCGG ATCTGCTCAT CGGAACGCCG ACCGCTGCGG CGACCGCGAC CCGCGTTGGG ATTGCGGCTG TCGCAATCGA AGGTGACGAT TTGCTTGGCA CGGCCGGAGA GACACGGCTT GCAACGCGCA TCGGCCGGGC GCTGGCCGCA CAGCAAATTG GTTTCACCGC TGGGGCCGGG ACGTCTCCGT ATCGGGCAGG TTGGCTGAAG CGCAGTCCGG ATTGGCACAT CAAGCGTGAG GTGAGATGA
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Protein sequence | MEKALQPPTR ERRLNGVSAY LGDVASLIAE LEAGPPASRI RTFSQVASDD VSIALRVLAE VEGLGIIVHG ARGCAGALVR SRPGRPWAVT NLDQRDTILG ADGNLARTLR RLHQRHRPWG IVVVATPVVA INNDDIQAVA QELSDELGIP VVELRTDGFR SRIGATGYDI ASAALASLVP PQHGRRRDLI NLLAFERGPG LTAVVQQLAG LGLEVNLVPA GAGQEAFAKA AQAVLSVAVF QDEADVLRRE LDRLHRVPFL HLPPPIGSTG ALRFVEAVAE ATERPLPIRI DDRISTDLLE DRRVVIALPP SQALAVAELV VQFGGRIAGI SVDWIDSLHV EGLKALTNAA TVALHVGAGQ AFELVNWLGK IEPDLLIGTP TAAATATRVG IAAVAIEGDD LLGTAGETRL ATRIGRALAA QQIGFTAGAG TSPYRAGWLK RSPDWHIKRE VR
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